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@gmod/bam

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@gmod/bam

Parser for BAM and BAM index (bai) files

  • 1.0.6
  • Source
  • npm
  • Socket score

Version published
Weekly downloads
2.2K
decreased by-14.35%
Maintainers
5
Weekly downloads
 
Created
Source

Generated with nod NPM version Build Status Coverage Status

Install

$ npm install --save @gmod/bam

Usage

const {BamFile} = require('@gmod/bam');

const t = new BamFile({
		bamPath: 'test.bam',
});

var header = await t.getHeader()

var records = await t.getRecordsForRange('ctgA', 1, 50000)

Input are 0-based half-open coordinates (note: not the same as samtools view coordinate inputs!)

License

MIT © Colin Diesh

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Package last updated on 19 Oct 2018

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