[!NOTE] We are rewriting CeleScope pipelines using nextflow to achieve better scalability and reproducibility. For a list of available pipelines, see nf-celescope. We recommend using nf-celescope whenever possible.
CeleScope is a collection of bioinfomatics analysis pipelines to process single cell sequencing data generated with Singleron products. These pipelines take paired-end FASTQ files as input and generate output files which can be used for downstream data analysis as well as a summary of QC criteria.
If you have problems connecting to github, try: https://gitee.com/singleron-rd/celescope/
Please use the issue tracker for questions and malfunctions.
CeleScope is currently developed by Singleron Biotechnologies.
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Single Cell Analysis Pipelines
We found that celescope demonstrated a healthy version release cadence and project activity because the last version was released less than a year ago. It has 1 open source maintainer collaborating on the project.
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