nipy

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.. image:: https://codecov.io/gh/nipy/nipy/branch/main/graph/badge.svg :target: https://app.codecov.io/gh/nipy/nipy/branch/main

==== NIPY

Neuroimaging tools for Python.

The aim of NIPY is to produce a platform-independent Python environment for the analysis of functional brain imaging data using an open development model.

In NIPY we aim to:

1. Provide an open source, mixed language scientific programming environment suitable for rapid development.

2. Create software components in this environment to make it easy to develop tools for MRI, EEG, PET and other modalities.

3. Create and maintain a wide base of developers to contribute to this platform.

4. To maintain and develop this framework as a single, easily installable bundle.

NIPY is the work of many people. We list the main authors in the file AUTHOR in the NIPY distribution, and other contributions in THANKS.

Website

Current information can always be found at the NIPY project website <http://nipy.org/nipy>_.

Mailing Lists

For questions on how to use nipy or on making code contributions, please see the neuroimaging mailing list:

https://mail.python.org/mailman/listinfo/neuroimaging

Please report bugs at github issues:

https://github.com/nipy/nipy/issues

You can see the list of current proposed changes at:

https://github.com/nipy/nipy/pulls

Code

You can find our sources and single-click downloads:

• Main repository_ on Github;
• Documentation_ for all releases and current development tree;
• Download the current development version_ as a tar/zip file;
• Downloads of all available releases_.

.. _main repository: https://github.com/nipy/nipy .. _Documentation: http://nipy.org/nipy .. _current development version: https://github.com/nipy/nipy/archive/main.zip .. _available releases: http://pypi.python.org/pypi/nipy

Tests

To run nipy's tests, you will need to install the pytest_ Python testing package::

pip install pytest

Then::

pytest nipy

You can run the doctests along with the other tests with::

pip install pytest-doctestplus

Then::

pytest --doctest-plus nipy

Installation

See the latest installation instructions_.

License

We use the 3-clause BSD license; the full license is in the file LICENSE in the nipy distribution.

.. links: .. _python: http://python.org .. _numpy: http://numpy.org .. _scipy: http://scipy.org .. _sympy: http://sympy.org .. _nibabel: http://nipy.org/nibabel .. _ipython: http://ipython.org .. _matplotlib: http://matplotlib.org .. _pytest: http://pytest.org .. _installation instructions: http://nipy.org/nipy/users/installation.html