higlass-labeled-annotation

Labeled Annotation Track for HiGlass

An annotation track with a beautiful white outline and a carefully crafted text label that will make your gorgeous annotations shine!

Note: This is the source code for labeled annotation track. You might want to check out HiGlass core repositories too:

• HiGlass viewer: https://github.com/hms-dbmi/higlass
• HiGlass server: https://github.com/hms-dbmi/higlass-server

Installation

npm install higlass-scalable-insets

Usage

• Make sure you load this track prior to hglib.js. For example:

<script src="higlass-labeled-annotation.js"></script>
<script src="hglib.js"></script>
<script>
  ...
</script>

• Configure the track in the view config.

{
  ...,
  tracks: {
    center: [
      {
        type: 'labeled-annotations',
        options: {
          regions: [
            [
              100, 200,
              100, 200,
              'rgba(0, 0, 0, 0)',
              'fuchsia',
              10, 10,
              'Super'
            ],
            [
              300, 400
              100, 200,
              'rgba(0, 0, 0, 0)',
              'orange',
              10, 10,
              'cool'
            ],
          ]
        },
      },
      ...
    ]
  }
}

Take a look at src/index.html for an example.

Development

Installation

$ git clone https://github.com/flekschas/higlass-labeled-annotation && higlass-labeled-annotation
$ npm install

Commands

Developmental server: npm start

Production build: npm run build

Prerelease build: npm run prerelease