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higlass - npm Package Versions
Changelog
v1.11.2
- Fix registration of plugin tracks
- Don't try to render names of filler annotations
Changelog
v1.11.1
- Fix multivec SVG export
- Added
ChromosomeInfoandSearchFieldclasses toAVAILABLE_TO_PLUGINS.
Changelog
v1.11.0
- Make gene annotations rotatable so that they can be added on the left
- Tracks can now modify their own dimensions by publishing
trackDimensionsModified. - Fixed a bug preventing usage of
data.urland HorizontalMultivecTrack server-side aggregation simultaneously. - Fixed a bug preventing an updated value of
track.options.selectRowsfrom triggering a HorizontalMultivecTrack track update when using server-side aggregation (track.options.selectRowsAggregationMethod === 'server'). - Added the JS API
.on('geneSearch', callback)option for subscribing to gene search events. - Simplify plugin track registry
- Implemented plugin data fetchers.
Changelog
v1.10.2
- Remove view config validation from
hgApi.getViewConfig()andhgApi.setViewConfig()and instead move it into a new method calledhgApi.validateViewConfig(viewConfig, { verbose: false } = {})
Changelog
v1.10.1
- Remove text/plain encoding from tile proxy text fetcher
- Added the
selectRowsAggregationMethodoption for thehorizontal-multivectrack to enable server-side aggregation if set to"server"rather than the default"client". - In the view config, moved the
fileUrltrack property under thedataproperty:data: { url, server, filetype }.
Changelog
v1.10.0
- Fixed horizontal and vertical cross sections
- Changed the style for the mouse over dialog to have a maximum width of 50 and to break words so that it doesn't go off the screen if there's a very long mouseover text.
- Lower the default annotation height in the Gene Annotations track
- Colors for rules
- Ability to load genome position search box chromosome sizes from an arbitrary location
- Plugin tracks can provide their own config menu options
- Remove horizontal-_ and vertical-_ prefixes from track names
- Load matrices with "None" data transform without crashing
- Add a view for showing schema log messages when JSON codes are edited in a config view.
Changelog
v1.9.5
- Removed styles for naked td tag
- Reader for text genbank data (i.e. not pulled from a url)
Changelog
v1.9.4
- Added the
resolveImmediatelyparameter to the setViewConfig API call. - Zooming can now be restricted by specifying
zoomLimitsin the viewconf. - Fixed bug where the track config menu improperly positioned when clicked twice.
- Update the heatmap option interface to allow seeing the preview when a color picker is opened.
- Display an error message on tiles with errors in them
- Don't try to assign a color value scale if the colorEncoding is set to itemRgb. itemRgb means that the color is present directly in the annotation
- Add an option to separate the + / - strand annotations in the bedlike track
Changelog
v1.9.3
- Consolidated track options of horizontal and vertical tracks
- Set background of new heatmap tracks in a combined track to
transparentwhen added via the track context menu. - Fixed bug where heatmap labels could not be hidden.
- The position of labels and colorbars for split heatmaps can now be changed.
- Use itemRgb field in bed files as the default coloring for bedlike tracks
Changelog
v1.9.2
- Fixed divided tracks bug by adding denseDataExtrema
- Fixed divergent bar track
- Made the bar track compatible with the local tile fetcher
- Added fontColor, fontSize and fillOpacity options to BedLikeTrack
- Added cheat code for making the component editable (i.e. with headers)
- Fixed track names in config menu
- Keep locks on track type change
- Fix crashing higlass on non-existent value scale lock member