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gritic

A module to time complex copy number gains in cancer genomes

    0.0.3

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A tool for timing complex copy number gains in cancer. Provides gain timing estimates for segments with a total copy number of up to 9. Only copy number segments with 10 or more SNVs will be timed.

Each gain timing is measured in mutation time, a scale that ranges from 0 to 1. A timing of 0 indicates that the gain occured close to conception and 1 that the gain occurred very close to the emergence of the tumour's most recent common ancestor.


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