mopti

Mopti

Mopti is a multivariate optimization library in Ruby. Mopti supports Nelder-Mead simplex method and Scaled Conjugate Gradient.

Installation

Add this line to your application's Gemfile:

gem 'mopti'

And then execute:

$ bundle install

Or install it yourself as:

$ gem install mopti

Documentation

• Mopti API Documentation

Usage

Example 1. Linear Regression with Nelder-Mead simplex method

require 'numo/narray'
require 'numo/gnuplot'
require 'mopti'

# Define objective function.
obj_fnc = proc do |w, x, y|
  n_samples = x.shape[0]
  ((y - x.dot(w))**2).sum.fdiv(n_samples)
end

# Explanatory variables.
x = Numo::DFloat[0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10]

# Dependent variables.
y = 3 * x + 2

# Extend variable for intercept.
xb = Numo::DFloat.vstack([x, [1] * x.size]).transpose.dup

# Optimize parameter vectors.
res = Mopti::minimize(algorithm: 'Nelder-Mead', fnc: obj_fnc, x_init: Numo::DFloat.zeros(2), args: [xb, y])

# Output result.
pp res

a, b = res[:x].to_a
Numo.gnuplot do
  set(terminal: 'png')
  set(output: 'example1.png')
  plot [[0, 10], [a * x[0] + b, a * x[-1] + b], w: :lines, lw: 1, t: 'parameters'],
       [x, y, pt: 6, ps: 2, t: 'data']
end

$ brew install gnuplot
$ gem install mopti numo-narray numo-gnuplot
$ ruby example1.rb
{:x=>Numo::DFloat(view)#shape=[2]
[3, 2],
 :n_fev=>177,
 :n_iter=>91,
 :fnc=>2.290874014308807e-13}

Development

After checking out the repo, run bin/setup to install dependencies. Then, run rake spec to run the tests. You can also run bin/console for an interactive prompt that will allow you to experiment.

To install this gem onto your local machine, run bundle exec rake install. To release a new version, update the version number in version.rb, and then run bundle exec rake release, which will create a git tag for the version, push git commits and tags, and push the .gem file to rubygems.org.

Contributing

Bug reports and pull requests are welcome on GitHub at https://github.com/yoshoku/mopti. This project is intended to be a safe, welcoming space for collaboration, and contributors are expected to adhere to the code of conduct.

Code of Conduct

Everyone interacting in the Mopti project's codebases, issue trackers, chat rooms and mailing lists is expected to follow the code of conduct.