@metrichor/nextclade
Advanced tools
We have recreated the Nextstrain/Nextclade table as a reusable web component.
There are three strategies we recommend for using the @metrichor/nextclade web component built with Stencil.
<script src='https://unpkg.com/@metrichor/nextclade@0.0.11/dist/nextclade/nextclade.esm.js'></script> in the head of your index.htmlnpm install @metrichor/nextclade --save<script src='node_modules/@metrichor/nextclade/dist/nextclade/nextclade.esm.js'></script> in the head of your index.htmlnpm install @metrichor/nextclade --saveimport @metrichor/nextclade;To use the Nextclade table in your HTML you will need to create a nxt-table tag and set the data attribute with the output from the Nextstrain/Nextclade pipeline
For example
<body>
<nxt-table />
<script defer>
const data = [
{
"seqName": "barcode02 MN908947.3",
"errors": [
"Unable to align: no seed matches"
]
},
{
"seqName": "Bangladesh/BCSIR-NILMRC-257/2020",
"substitutions": [
{
"pos": 240,
"refNuc": "C",
"queryNuc": "T",
"aaSubstitutions": [],
"pcrPrimersChanged": [],
...
}
],
...
}
...
],
var nxt = document.querySelector('nxt-table')
nxt.data = data
</script>
</body>
FAQs
Nextclade visualisation
We found that @metrichor/nextclade demonstrated a not healthy version release cadence and project activity because the last version was released a year ago. It has 4 open source maintainers collaborating on the project.
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