version 2.38.0 - 2022/09/16

• Mutations now separate out "undeletions" & add information on what the categories represent. See PR 1542 for more.
• Bugfix where certain GISAID accessions may cause a crash when clicked. See PR 1531 for more.
• Duplicate / missing node names now emit a warning to the console, not an error. See PR 1543 for more.

Internal (Nextstrain-related) changes

• Documentation theme added. See PR 1535 for more.
• Bioconda rebuild instructions added. See PR 1539 for more.
• Minor docs formatting fixes. See PR 1533 for more.

version 2.37.3 - 2022/06/16

• Allow temporal colour scales. See PR 1523 for more.
• Change ordering of sidebar tree options. See PR 1524 for more.
• (Docs) Corrected note about CORS. See PR 1525 for more.
• (Internal) Automated how we make GitHub releases. See PR 1518 for more.

version 2.37.2 - 2022/05/27

• Allow trees with duplicate node names / missing node names (but raise an error in the console). See PR 1514 for more.
• Fix a bug where the right hand side of the tree could disappear. See PR 1513 for more.

version 2.37.1 - 2022/05/11

• Ensure legend colours are exactly the same as the tip colours. See PR 1506 for more.
• Always show branch labels if they are the root of a subtree. See PR 1503 for more.
• Docs improvements. See PR 1507 for more.
• CI improvements. See PR 1505 for more.

version 2.37.0 - 2022/04/28

• Improved footer styling of tables. See PR 1502 for more.
• Branch labels are now shown/hidden depending according to the proportion of visible tips they define. See PR 1501 for more.

version 2.36.0 - 2022/03/28

Functional improvements

• Dynamically update regression lines to reflect filtered data. See PR 1484 for more.
• Scatterplot axes can now use "node-order" which is the order nodes appear on the rectangular tree. See PR 1494 for more.
• Show an "experimental" icon and on-hover info text for the explode-tree functionality. See PR 1486 for more.
• You can now use the escape key to remove a tip/branch info modal over the tree. See PR 1485 for more.

Bugfixes

• Drag-n-drop metadata now works for the second tree. See PR 1489 for more.
• Available filters are now correct when switching from a narrative to exploding the data. See PR 1493 for more.
• The auspice server only accepts valid sidecar file types. See PR 1495 for more.

version 2.35.0 - 2022/03/16

• Upgrade how we render dropdown menus, which greatly improves the display of long options (e.g. submitting labs). See PR 1482 for more.

version 2.34.1 - 2022/03/08

• (Minor change) expose functions for use in auspice.us. See PR 1478 for more.

version 2.34.0 - 2022/03/02

Major changes

• Measurements panel intended for displaying titer or DMS data where a tip in the tree has multiple values associated with it. This function requires a dataset with a _measurements.json sidecar file See PR 1452 for more.

Minor changes

• Improved YAML parsing for narratives See PR 1472 for more.
• Remove unused properties from tip-frequencies panel. See PR 1471 for more.
• Fixed a bug where shift+clicking on branches for trees without mutations defined caused a crash. See PR 1475 for more.

version 2.33.0 - 2022/02/15

• (Experimental) Explode phylogeny into subtrees and allow multiple trees to be provided in the dataset. See PR 1442 for more.
• Categorise mutations to better understand sequence changes on branches and tips. See PR 1449 for more.
• Add a datepicker to allow precise changes to the selected date range. See PR 1412 for more.
• Allow build-time customizable fine print. See PR 1448 for more.
• Remove scrollbar in panels when no scrolling is possible See PR 1439 for more.
• Allow searching in the color-by dropdown. See PR 1456 for more.

There have also been internal changes related to how we run CI. These should not affect using Auspice as a library / CLI.