![Introducing Enhanced Alert Actions and Triage Functionality](https://cdn.sanity.io/images/cgdhsj6q/production/fe71306d515f85de6139b46745ea7180362324f0-2530x946.png?w=800&fit=max&auto=format)
Product
Introducing Enhanced Alert Actions and Triage Functionality
Socket now supports four distinct alert actions instead of the previous two, and alert triaging allows users to override the actions taken for all individual alerts.
bioutils
Advanced tools
Utilities for Working with Bioinformatics Files (fasta, fna, nexus and newick) in JavaScript
Readme
Goals:
npm install bioutils
or
yarn add bioutils
const bioUtils = require("bioutils");
// Read data from a file into a json object.
const exampleBioData = bioUtils.readFileSync("./exampleData.fasta");
// Get info about the data.
/*TODO: not sure if this will be implemented
// Some info is available in the "metaData".
const numberOfSequences = exampleBioData['metaData']['numberOfSequences'];
*/
// Other info can be obtained with functions.
const containsStopCodons = bioUtils.containsStopCodons(exampleBioData);
// Perform simple manipulations on the data.
const exampleBioDataWithoutStopCodons = bioUtils.replaceStopCodons(exampleBioData, "-");
const exampleBioDataAminoAcids = bioUtils.translateToAminoAcid(exampleBioData);
// Write the data to any file format you want.
bioUtils.writeFileSync(exampleBioDataWithoutStops, 'nexus', 'exampleOutputFile.nexus')
biUtils.writeFileSync(exampleBioDataAminoAcis, 'fasta', 'exampleOutputFileAA.fasta')
Test yarn test
Lint yarn lint
Build Docs yarn document
Publish to NPM... just npm publish
FAQs
Utilities for Working with Bioinformatics Files (fasta, fna, nexus and newick) in JavaScript
The npm package bioutils receives a total of 1 weekly downloads. As such, bioutils popularity was classified as not popular.
We found that bioutils demonstrated a not healthy version release cadence and project activity because the last version was released a year ago. It has 1 open source maintainer collaborating on the project.
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Product
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