Data Structures

Logical Graph Builder that can be used for various problems that can be modeled as a graph data structure

Beautiful and user friendly data structures for quantum chemistry.

A Python library for reading and writing structured binary data.

Quality control scripts for FastSurfer and FreeSurfer structural MRI data

Python wrapper for diffx - semantic diffing of JSON, YAML, TOML, XML, INI, and CSV files. Focuses on structural meaning rather than formatting.

A small package of basic data structures and algorithms

A Python module for preserving structural isomorphisms across data transformations, ensuring reversible and type-stable conversions between formats like DataFrame, JSON, and dict.

A lightweight and extensible Python package for managing data, tailored for researchers working with structured data.

A library for computing topological data structures

A pure-python module to read and write binary data

AI-powered analysis framework for structured data files and databases

Efficient data structures and IO for whole slide image analysis

Ancestral recombination graph (ARG) data structure and operations

Structured, metadata-enhanced data storage.

Data structure for complexe enumeration.

Utility to remove or replace sensitive data from complex structures.

Basic and Modded data structures with rust backend for speed.

Transform nested data structures into Python objects

Human-readable versatile data format

A highly flexible and customizable library for visualizing electronic structure data from VASP calculations

Persistent data structures mimicking as Python native containers

Generate a StateGraph of LangGraph that can be compiled from structured data.

Profiling Protein Structures from Protein Data Bank and integrate various resources.🏄‍♂️

A tool to automate retrieving data from CAZy, build a local CAZyme SQL database, and throughly interrogating the data. Also, automate retrieving protein data, sequences, EC numbers and structure files for specific datasets in the CAZyme database from UniProt, GenBank and PDB.

typeit brings typed data into your project

Python SDK for Sensible, the developer-first platform for extracting structured data from documents so that you can build document-automation features into your SaaS products

API and data structures for efficient AI research.

A SciELO library to abstract a JSON data structure that is a product of the ISIS2JSON conversion using the ISIS2JSON type 3 data model.

Parse and manipulate structured data and metadata in a tabular format.

FHIR-PYrate is a package that provides a high-level API to query FHIR Servers for bundles of resources and return the structured information as pandas DataFrames. It can also be used to filter resources using RegEx and SpaCy and download DICOM studies and series.

Curated collection of data structures for Python.

Modular Python tool for profiling files, analyzing directory structures, and inspecting image data

Base data structures for PII Processing

A set of functional data structures for Python

A package implementing a vantage-point data structure, for efficient nearest neighbor searching.

Comprehensive detection of multiscale and non-canonical structural variations from Hi-C data

Welcome to coding in paradise!

Linked list data structures (in pure Python)

A framework that enables efficient extraction of structured data from unstructured text using large language models (LLMs).

CSI-Cancer image-related data structures and basic processing.

typed-data-structures - A collection of data structures written in python with propper type annotations

Configure your data for visualization with dms-viz.github.io

Versatile pipeline for processing protein structure data for deep learning applications.

Comprehensive validation library for nested data structures.

a versatile halfedge-based data structure for representing and manipulating polygon meshes

Python library to convert Python class instances(Objects) both flat and nested into a dictionary data structure. It's very useful in converting Python Objects into JSON format especially for nested objects, because they can't be handled well by json library

Convert markdown and its elements (tables, lists, code, etc.) into structured, easily processable data formats like lists and hierarchical dictionaries (or JSON), with support for parsing back to markdown.

Python bindings for the Rust `fst` crate, providing sets and maps backed by finite state transducers.

Redis-backed data structures for building scalable and resilient applications

The PySubnetTree package provides a Python data structure SubnetTree