The Environment for Tree Exploration (ETE) is a Python programming toolkit that assists in the recontruction, manipulation, analysis and visualization of phylogenetic trees (although clustering trees or any other tree-like data structure are also supported).
ETE is currently developed as a tool for researchers working in phylogenetics and genomics. If you use ETE for a published work, please cite:
::
Jaime Huerta-Cepas, François Serra and Peer Bork. "ETE 3: Reconstruction, analysis and visualization of phylogenomic data." Mol Biol Evol (2016) doi: 10.1093/molbev/msw046
Visit http://etetoolkit.org for more info.
FAQs
A Python Environment for (phylogenetic) Tree Exploration
We found that ete3 demonstrated a healthy version release cadence and project activity because the last version was released less than a year ago. It has 1 open source maintainer collaborating on the project.
Did you know?
Socket for GitHub automatically highlights issues in each pull request and monitors the health of all your open source dependencies. Discover the contents of your packages and block harmful activity before you install or update your dependencies.
Product
Socket now supports Scala and Kotlin, bringing AI-powered threat detection to JVM projects with easy manifest generation and fast, accurate scans.
Application Security
/Security News
Socket CEO Feross Aboukhadijeh and a16z partner Joel de la Garza discuss vibe coding, AI-driven software development, and how the rise of LLMs, despite their risks, still points toward a more secure and innovative future.
Research
/Security News
Threat actors hijacked Toptal’s GitHub org, publishing npm packages with malicious payloads that steal tokens and attempt to wipe victim systems.
