NeuroConv is a Python package for converting neurophysiology data in a variety of proprietary formats to the Neurodata Without Borders (NWB) standard.
Features:
We always recommend installing and running Python packages in a clean environment. One way to do this is via conda environments:
conda create --name <give the environment a name> --python <choose a version of Python to use>
conda activate <environment name>
To install the latest stable release of neuroconv though PyPI, run:
pip install neuroconv
To install the current unreleased main branch (requires git to be installed in your environment, such was via conda install git), run:
pip install git+https://github.com/catalystneuro/neuroconv.git@main
NeuroConv also supports a variety of extra dependencies that can be specified inside square brackets, such as
pip install "neuroconv[openephys, dandi]"
which will then install extra dependencies related to reading OpenEphys data as well as the usage of the DANDI CLI (such as automatic upload to the DANDI Archive).
You can read more about these options in the main installation guide.
See our ReadTheDocs page for full documentation, including a gallery of all supported formats.
NeuroConv is distributed under the BSD3 License. See LICENSE for more information.
FAQs
Convert data from proprietary formats to NWB format.
We found that neuroconv demonstrated a healthy version release cadence and project activity because the last version was released less than a year ago. It has 4 open source maintainers collaborating on the project.
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