@phasefolio/mcp

@phasefolio/mcp

The PhaseFolio MCP client — exposes PhaseFolio's biotech rNPV / probability-of-success engine to any AI agent that speaks the Model Context Protocol.

PhaseFolio is an audit-grade asset valuation workspace for healthcare investors and tech transfer offices. This MCP server gives AI agents direct access to the same engine, scenarios, evidence registers, signed dossier exports, methodology, and competitive landscape that human analysts use in the product.

Install

Claude Desktop

Add to ~/Library/Application Support/Claude/claude_desktop_config.json (macOS) or %APPDATA%\Claude\claude_desktop_config.json (Windows):

{
  "mcpServers": {
    "phasefolio": {
      "command": "npx",
      "args": ["-y", "@phasefolio/mcp"]
    }
  }
}

For org-scoped tools (your own scenarios, projects, evidence, signed exports), set your bearer token:

{
  "mcpServers": {
    "phasefolio": {
      "command": "npx",
      "args": ["-y", "@phasefolio/mcp"],
      "env": {
        "PHASEFOLIO_TOKEN": "pft_..."
      }
    }
  }
}

Restart Claude Desktop.

Claude Code

HTTP-native — no wrapper needed:

claude mcp add --scope user --transport http phasefolio https://app.phasefolio.com/api/mcp
# with bearer:
claude mcp add --scope user --transport http phasefolio https://app.phasefolio.com/api/mcp \
  --header "Authorization: Bearer pft_..."

Codex CLI

codex mcp add phasefolio --http https://app.phasefolio.com/api/mcp

Cursor / other MCP clients

Use the Claude Desktop snippet above (stdio) or point your client at https://app.phasefolio.com/api/mcp if it speaks streamable HTTP.

Tools

Nine tools across two auth tiers.

Public (no token)

• query_benchmarks — anonymized network statistics across the PhaseFolio scenario base (PoS by indication × modality, cost / duration percentiles)
• verify_export — verify a signed PhaseFolio dossier by content hash or URL; returns issued timestamp, methodology version, originating-org identifier
• get_methodology — fetch any methodology section in citable form (backtest, PoS calibration, IRA framework, evidence standards, network benchmarks)

Bearer (PHASEFOLIO_TOKEN env var, scoped to your org)

• get_project — project metadata: indication, sub-indication, modality, biomarker, asset name, stage at entry
• list_scenarios — scenarios in a project with top-line eNPV / rNPV
• get_scenario — full scenario inputs + computed outputs (eNPV, rNPV, cumulative PoS, per-stage breakdown, top sensitivity drivers)
• get_evidence — evidence-register entries: citations, sources, supporting documents
• get_dossier — structured dossier JSON, mirroring the IC Dossier PDF / Excel exports
• query_landscape — asset-anchored competitive landscape (comparable trials, competing programs, sponsor activity, biomarker overlap) sourced from CT.gov + FDA + curated enrichment

Get a bearer token

Bearer tokens are issued per organization. Sign up at app.phasefolio.com (free Research Tier available for academics) — token issuance is currently manual for design partners; contact us at phasefolio.com/contact for access.

Verify a signed export

Every PhaseFolio dossier export carries a cryptographic signature that ties the file content to the engine version and methodology version that produced it. AI agents can verify any PhaseFolio file in one call:

verify_export({ hash: "<sha256-of-the-file>" })

or by URL:

verify_export({ artifact_url: "https://..." })

The public key lives at https://app.phasefolio.com/.well-known/phasefolio-pubkey.pem. Methodology versions and the verify endpoint are documented at https://app.phasefolio.com/methodology.

Links

• Product: https://app.phasefolio.com
• Methodology hub: https://app.phasefolio.com/methodology
• Public verify endpoint: https://app.phasefolio.com/api/v1/verify
• MCP discovery: https://app.phasefolio.com/.well-known/mcp.json
• Official MCP Registry listing: https://registry.modelcontextprotocol.io/v0/servers?search=phasefolio
• Smithery listing: https://smithery.ai/servers/phasefolio/mcp

License

MIT