bionode-ncbi
Advanced tools
Comparing version 0.6.1 to 0.6.2
{ | ||
"name": "bionode-ncbi", | ||
"description": "Node.js module for working with the NCBI API (aka e-utils) using Streams.", | ||
"version": "0.6.1", | ||
"version": "0.6.2", | ||
"homepage": "http://github.com/bionode/bionode-ncbi", | ||
@@ -6,0 +6,0 @@ "repository": { |
@@ -82,3 +82,8 @@ var fs = require('fs') | ||
var msg = 'same as previous but with a limit of 1' | ||
t.deepEqual(results2, [guillardiaThetaSRAData[11]], msg) | ||
guillardiaThetaSRAData.forEach(findMatchAndTest) | ||
function findMatchAndTest(sradata) { | ||
if (sradata.uid === results2[0].uid) { | ||
t.deepEqual(results2, [sradata], msg) | ||
} | ||
} | ||
}) | ||
@@ -85,0 +90,0 @@ |
[ | ||
{"uid":"35523","expxml":{"Summary":{"Title":"454 sequencing of Guillardia theta CCMP2712 random whole genome shotgun library.","Platform":{"_":"LS454","instrument_model":"454 GS FLX"},"Statistics":{"total_runs":"1","total_spots":"19695","total_bases":"5631540","total_size":"13923541","load_done":"true","static_data_available":"true","cluster_name":"public"}},"Submitter":{"acc":"SRA025478","center_name":"JGI","contact_name":"Sam Pitluck","lab_name":"PGF"},"Experiment":{"acc":"SRX029662","ver":"1","status":"public","name":"454 sequencing of Guillardia theta CCMP2712 random whole genome shotgun library."},"Study":{"acc":"SRP004020","name":"Guillardia theta CCMP2712"},"Organism":{"taxid":"905079","ScientificName":"Guillardia theta CCMP2712"},"Sample":{"acc":"SRS118433","name":""},"Instrument":{"LS454":"454 GS FLX"},"Library_descriptor":{"LIBRARY_NAME":"FTZB","LIBRARY_STRATEGY":"WGS","LIBRARY_SOURCE":"GENOMIC","LIBRARY_SELECTION":"RANDOM","LIBRARY_LAYOUT":{"SINGLE":""}},"Biosample":{"id":"116900","acc":"SAMN00116900","sample_id":"123602","sample_acc":"SRS118433"},"Bioproject":"SRP004020"},"runs":{"Run":[{"acc":"SRR070672","total_spots":"19695","total_bases":"5631540","load_done":"true","is_public":"true","cluster_name":"public","static_data_available":"true"}]},"extlinks":" ","createdate":"2011/10/29","updatedate":"2010/10/29"} | ||
, | ||
{"uid":"35524","expxml":{"Summary":{"Title":"454 sequencing of Guillardia theta CCMP2712 random whole genome shotgun library.","Platform":{"_":"LS454","instrument_model":"454 GS FLX"},"Statistics":{"total_runs":"1","total_spots":"204588","total_bases":"58208970","total_size":"146515335","load_done":"true","static_data_available":"true","cluster_name":"public"}},"Submitter":{"acc":"SRA025478","center_name":"JGI","contact_name":"Sam Pitluck","lab_name":"PGF"},"Experiment":{"acc":"SRX029663","ver":"1","status":"public","name":"454 sequencing of Guillardia theta CCMP2712 random whole genome shotgun library."},"Study":{"acc":"SRP004020","name":"Guillardia theta CCMP2712"},"Organism":{"taxid":"905079","ScientificName":"Guillardia theta CCMP2712"},"Sample":{"acc":"SRS118433","name":""},"Instrument":{"LS454":"454 GS FLX"},"Library_descriptor":{"LIBRARY_NAME":"FTZB","LIBRARY_STRATEGY":"WGS","LIBRARY_SOURCE":"GENOMIC","LIBRARY_SELECTION":"RANDOM","LIBRARY_LAYOUT":{"SINGLE":""}},"Biosample":{"id":"116900","acc":"SAMN00116900","sample_id":"123602","sample_acc":"SRS118433"},"Bioproject":"SRP004020"},"runs":{"Run":[{"acc":"SRR070673","total_spots":"204588","total_bases":"58208970","load_done":"true","is_public":"true","cluster_name":"public","static_data_available":"true"}]},"extlinks":" ","createdate":"2011/10/29","updatedate":"2010/10/29"} | ||
, | ||
{"uid":"35525","expxml":{"Summary":{"Title":"454 sequencing of Guillardia theta CCMP2712 random whole genome shotgun library.","Platform":{"_":"LS454","instrument_model":"454 GS FLX"},"Statistics":{"total_runs":"1","total_spots":"295457","total_bases":"85081326","total_size":"216274455","load_done":"true","static_data_available":"true","cluster_name":"public"}},"Submitter":{"acc":"SRA025478","center_name":"JGI","contact_name":"Sam Pitluck","lab_name":"PGF"},"Experiment":{"acc":"SRX029664","ver":"1","status":"public","name":"454 sequencing of Guillardia theta CCMP2712 random whole genome shotgun library."},"Study":{"acc":"SRP004020","name":"Guillardia theta CCMP2712"},"Organism":{"taxid":"905079","ScientificName":"Guillardia theta CCMP2712"},"Sample":{"acc":"SRS118433","name":""},"Instrument":{"LS454":"454 GS FLX"},"Library_descriptor":{"LIBRARY_NAME":"FTZB","LIBRARY_STRATEGY":"WGS","LIBRARY_SOURCE":"GENOMIC","LIBRARY_SELECTION":"RANDOM","LIBRARY_LAYOUT":{"SINGLE":""}},"Biosample":{"id":"116900","acc":"SAMN00116900","sample_id":"123602","sample_acc":"SRS118433"},"Bioproject":"SRP004020"},"runs":{"Run":[{"acc":"SRR070674","total_spots":"295457","total_bases":"85081326","load_done":"true","is_public":"true","cluster_name":"public","static_data_available":"true"}]},"extlinks":" ","createdate":"2011/10/29","updatedate":"2010/10/29"} | ||
, | ||
{"uid":"35526","expxml":{"Summary":{"Title":"454 sequencing of Guillardia theta CCMP2712 random whole genome shotgun library.","Platform":{"_":"LS454","instrument_model":"454 GS FLX"},"Statistics":{"total_runs":"1","total_spots":"11355","total_bases":"2962463","total_size":"7479863","load_done":"true","static_data_available":"true","cluster_name":"public"}},"Submitter":{"acc":"SRA025478","center_name":"JGI","contact_name":"Sam Pitluck","lab_name":"PGF"},"Experiment":{"acc":"SRX029665","ver":"1","status":"public","name":"454 sequencing of Guillardia theta CCMP2712 random whole genome shotgun library."},"Study":{"acc":"SRP004020","name":"Guillardia theta CCMP2712"},"Organism":{"taxid":"905079","ScientificName":"Guillardia theta CCMP2712"},"Sample":{"acc":"SRS118433","name":""},"Instrument":{"LS454":"454 GS FLX"},"Library_descriptor":{"LIBRARY_NAME":"FTZC","LIBRARY_STRATEGY":"WGS","LIBRARY_SOURCE":"GENOMIC","LIBRARY_SELECTION":"RANDOM","LIBRARY_LAYOUT":{"SINGLE":""}},"Biosample":{"id":"116900","acc":"SAMN00116900","sample_id":"123602","sample_acc":"SRS118433"},"Bioproject":"SRP004020"},"runs":{"Run":[{"acc":"SRR070675","total_spots":"11355","total_bases":"2962463","load_done":"true","is_public":"true","cluster_name":"public","static_data_available":"true"}]},"extlinks":" ","createdate":"2011/10/29","updatedate":"2010/10/29"} | ||
, | ||
{"uid":"35527","expxml":{"Summary":{"Title":"454 sequencing of Guillardia theta CCMP2712 random whole genome shotgun library.","Platform":{"_":"LS454","instrument_model":"454 GS FLX"},"Statistics":{"total_runs":"1","total_spots":"286676","total_bases":"72084130","total_size":"191124885","load_done":"true","static_data_available":"true","cluster_name":"public"}},"Submitter":{"acc":"SRA025478","center_name":"JGI","contact_name":"Sam Pitluck","lab_name":"PGF"},"Experiment":{"acc":"SRX029666","ver":"1","status":"public","name":"454 sequencing of Guillardia theta CCMP2712 random whole genome shotgun library."},"Study":{"acc":"SRP004020","name":"Guillardia theta CCMP2712"},"Organism":{"taxid":"905079","ScientificName":"Guillardia theta CCMP2712"},"Sample":{"acc":"SRS118433","name":""},"Instrument":{"LS454":"454 GS FLX"},"Library_descriptor":{"LIBRARY_NAME":"FTZC","LIBRARY_STRATEGY":"WGS","LIBRARY_SOURCE":"GENOMIC","LIBRARY_SELECTION":"RANDOM","LIBRARY_LAYOUT":{"SINGLE":""}},"Biosample":{"id":"116900","acc":"SAMN00116900","sample_id":"123602","sample_acc":"SRS118433"},"Bioproject":"SRP004020"},"runs":{"Run":[{"acc":"SRR070676","total_spots":"286676","total_bases":"72084130","load_done":"true","is_public":"true","cluster_name":"public","static_data_available":"true"}]},"extlinks":" ","createdate":"2011/10/29","updatedate":"2010/10/29"} | ||
, | ||
{"uid":"35528","expxml":{"Summary":{"Title":"454 sequencing of Guillardia theta CCMP2712 random whole genome shotgun library.","Platform":{"_":"LS454","instrument_model":"454 GS FLX"},"Statistics":{"total_runs":"1","total_spots":"971916","total_bases":"513131403","total_size":"1174625556","load_done":"true","static_data_available":"true","cluster_name":"public"}},"Submitter":{"acc":"SRA025478","center_name":"JGI","contact_name":"Sam Pitluck","lab_name":"PGF"},"Experiment":{"acc":"SRX029667","ver":"1","status":"public","name":"454 sequencing of Guillardia theta CCMP2712 random whole genome shotgun library."},"Study":{"acc":"SRP004020","name":"Guillardia theta CCMP2712"},"Organism":{"taxid":"905079","ScientificName":"Guillardia theta CCMP2712"},"Sample":{"acc":"SRS118433","name":""},"Instrument":{"LS454":"454 GS FLX"},"Library_descriptor":{"LIBRARY_NAME":"GGAN","LIBRARY_STRATEGY":"WGS","LIBRARY_SOURCE":"GENOMIC","LIBRARY_SELECTION":"RANDOM","LIBRARY_LAYOUT":{"SINGLE":""}},"Biosample":{"id":"116900","acc":"SAMN00116900","sample_id":"123602","sample_acc":"SRS118433"},"Bioproject":"SRP004020"},"runs":{"Run":[{"acc":"SRR070677","total_spots":"971916","total_bases":"513131403","load_done":"true","is_public":"true","cluster_name":"public","static_data_available":"true"}]},"extlinks":" ","createdate":"2011/10/29","updatedate":"2010/10/29"} | ||
, | ||
{"uid":"35529","expxml":{"Summary":{"Title":"454 sequencing of Guillardia theta CCMP2712 random whole genome shotgun library.","Platform":{"_":"LS454","instrument_model":"454 GS FLX"},"Statistics":{"total_runs":"1","total_spots":"1131540","total_bases":"588220300","total_size":"1327676112","load_done":"true","static_data_available":"true","cluster_name":"public"}},"Submitter":{"acc":"SRA025478","center_name":"JGI","contact_name":"Sam Pitluck","lab_name":"PGF"},"Experiment":{"acc":"SRX029668","ver":"1","status":"public","name":"454 sequencing of Guillardia theta CCMP2712 random whole genome shotgun library."},"Study":{"acc":"SRP004020","name":"Guillardia theta CCMP2712"},"Organism":{"taxid":"905079","ScientificName":"Guillardia theta CCMP2712"},"Sample":{"acc":"SRS118433","name":""},"Instrument":{"LS454":"454 GS FLX"},"Library_descriptor":{"LIBRARY_NAME":"GGAN","LIBRARY_STRATEGY":"WGS","LIBRARY_SOURCE":"GENOMIC","LIBRARY_SELECTION":"RANDOM","LIBRARY_LAYOUT":{"SINGLE":""}},"Biosample":{"id":"116900","acc":"SAMN00116900","sample_id":"123602","sample_acc":"SRS118433"},"Bioproject":"SRP004020"},"runs":{"Run":[{"acc":"SRR070678","total_spots":"1131540","total_bases":"588220300","load_done":"true","is_public":"true","cluster_name":"public","static_data_available":"true"}]},"extlinks":" ","createdate":"2011/10/29","updatedate":"2010/10/29"} | ||
, | ||
{"uid":"35530","expxml":{"Summary":{"Title":"454 sequencing of Guillardia theta CCMP2712 random whole genome shotgun library.","Platform":{"_":"LS454","instrument_model":"454 GS FLX"},"Statistics":{"total_runs":"1","total_spots":"875108","total_bases":"467593710","total_size":"1055151585","load_done":"true","static_data_available":"true","cluster_name":"public"}},"Submitter":{"acc":"SRA025478","center_name":"JGI","contact_name":"Sam Pitluck","lab_name":"PGF"},"Experiment":{"acc":"SRX029669","ver":"1","status":"public","name":"454 sequencing of Guillardia theta CCMP2712 random whole genome shotgun library."},"Study":{"acc":"SRP004020","name":"Guillardia theta CCMP2712"},"Organism":{"taxid":"905079","ScientificName":"Guillardia theta CCMP2712"},"Sample":{"acc":"SRS118433","name":""},"Instrument":{"LS454":"454 GS FLX"},"Library_descriptor":{"LIBRARY_NAME":"GGAN","LIBRARY_STRATEGY":"WGS","LIBRARY_SOURCE":"GENOMIC","LIBRARY_SELECTION":"RANDOM","LIBRARY_LAYOUT":{"SINGLE":""}},"Biosample":{"id":"116900","acc":"SAMN00116900","sample_id":"123602","sample_acc":"SRS118433"},"Bioproject":"SRP004020"},"runs":{"Run":[{"acc":"SRR070679","total_spots":"875108","total_bases":"467593710","load_done":"true","is_public":"true","cluster_name":"public","static_data_available":"true"}]},"extlinks":" ","createdate":"2011/10/29","updatedate":"2010/10/29"} | ||
, | ||
{"uid":"35531","expxml":{"Summary":{"Title":"454 sequencing of Guillardia theta CCMP2712 random whole genome shotgun library.","Platform":{"_":"LS454","instrument_model":"454 GS FLX"},"Statistics":{"total_runs":"1","total_spots":"1277503","total_bases":"657634727","total_size":"1479299694","load_done":"true","static_data_available":"true","cluster_name":"public"}},"Submitter":{"acc":"SRA025478","center_name":"JGI","contact_name":"Sam Pitluck","lab_name":"PGF"},"Experiment":{"acc":"SRX029670","ver":"1","status":"public","name":"454 sequencing of Guillardia theta CCMP2712 random whole genome shotgun library."},"Study":{"acc":"SRP004020","name":"Guillardia theta CCMP2712"},"Organism":{"taxid":"905079","ScientificName":"Guillardia theta CCMP2712"},"Sample":{"acc":"SRS118433","name":""},"Instrument":{"LS454":"454 GS FLX"},"Library_descriptor":{"LIBRARY_NAME":"GGAN","LIBRARY_STRATEGY":"WGS","LIBRARY_SOURCE":"GENOMIC","LIBRARY_SELECTION":"RANDOM","LIBRARY_LAYOUT":{"SINGLE":""}},"Biosample":{"id":"116900","acc":"SAMN00116900","sample_id":"123602","sample_acc":"SRS118433"},"Bioproject":"SRP004020"},"runs":{"Run":[{"acc":"SRR070680","total_spots":"1277503","total_bases":"657634727","load_done":"true","is_public":"true","cluster_name":"public","static_data_available":"true"}]},"extlinks":" ","createdate":"2011/10/29","updatedate":"2010/10/29"} | ||
, | ||
{"uid":"35532","expxml":{"Summary":{"Title":"454 sequencing of Guillardia theta CCMP2712 random whole genome shotgun library.","Platform":{"_":"LS454","instrument_model":"454 GS FLX"},"Statistics":{"total_runs":"1","total_spots":"873145","total_bases":"341989978","total_size":"860077955","load_done":"true","static_data_available":"true","cluster_name":"public"}},"Submitter":{"acc":"SRA025478","center_name":"JGI","contact_name":"Sam Pitluck","lab_name":"PGF"},"Experiment":{"acc":"SRX029671","ver":"1","status":"public","name":"454 sequencing of Guillardia theta CCMP2712 random whole genome shotgun library."},"Study":{"acc":"SRP004020","name":"Guillardia theta CCMP2712"},"Organism":{"taxid":"905079","ScientificName":"Guillardia theta CCMP2712"},"Sample":{"acc":"SRS118433","name":""},"Instrument":{"LS454":"454 GS FLX"},"Library_descriptor":{"LIBRARY_NAME":"GPNF","LIBRARY_STRATEGY":"WGS","LIBRARY_SOURCE":"GENOMIC","LIBRARY_SELECTION":"RANDOM","LIBRARY_LAYOUT":{"SINGLE":""}},"Biosample":{"id":"116900","acc":"SAMN00116900","sample_id":"123602","sample_acc":"SRS118433"},"Bioproject":"SRP004020"},"runs":{"Run":[{"acc":"SRR070681","total_spots":"873145","total_bases":"341989978","load_done":"true","is_public":"true","cluster_name":"public","static_data_available":"true"}]},"extlinks":" ","createdate":"2011/10/29","updatedate":"2010/10/29"} | ||
, | ||
{"uid":"35533","expxml":{"Summary":{"Title":"454 sequencing of Guillardia theta CCMP2712 random whole genome shotgun library.","Platform":{"_":"LS454","instrument_model":"454 GS FLX"},"Statistics":{"total_runs":"1","total_spots":"853766","total_bases":"335390762","total_size":"847553880","load_done":"true","static_data_available":"true","cluster_name":"public"}},"Submitter":{"acc":"SRA025478","center_name":"JGI","contact_name":"Sam Pitluck","lab_name":"PGF"},"Experiment":{"acc":"SRX029672","ver":"1","status":"public","name":"454 sequencing of Guillardia theta CCMP2712 random whole genome shotgun library."},"Study":{"acc":"SRP004020","name":"Guillardia theta CCMP2712"},"Organism":{"taxid":"905079","ScientificName":"Guillardia theta CCMP2712"},"Sample":{"acc":"SRS118433","name":""},"Instrument":{"LS454":"454 GS FLX"},"Library_descriptor":{"LIBRARY_NAME":"GPNF","LIBRARY_STRATEGY":"WGS","LIBRARY_SOURCE":"GENOMIC","LIBRARY_SELECTION":"RANDOM","LIBRARY_LAYOUT":{"SINGLE":""}},"Biosample":{"id":"116900","acc":"SAMN00116900","sample_id":"123602","sample_acc":"SRS118433"},"Bioproject":"SRP004020"},"runs":{"Run":[{"acc":"SRR070682","total_spots":"853766","total_bases":"335390762","load_done":"true","is_public":"true","cluster_name":"public","static_data_available":"true"}]},"extlinks":" ","createdate":"2011/10/29","updatedate":"2010/10/29"} | ||
, | ||
{"uid":"333627","expxml":{"Summary":{"Title":"Guillardia theta CCMP2712 Transcriptome","Platform":{"_":"ILLUMINA","instrument_model":"Illumina HiSeq 2000"},"Statistics":{"total_runs":"1","total_spots":"182747799","total_bases":"36549559800","total_size":"22708555668","load_done":"true","cluster_name":"public"}},"Submitter":{"acc":"SRA067334","center_name":"Dalhousie University","contact_name":"Naoko Tanifuji","lab_name":"John Archibald"},"Experiment":{"acc":"SRX242847","ver":"1","status":"public","name":"Guillardia theta CCMP2712 Transcriptome"},"Study":{"acc":"SRP018737","name":"Guillardia theta strain:CCMP2712 Transcriptome or Gene expression"},"Organism":{"taxid":"905079","ScientificName":"Guillardia theta CCMP2712"},"Sample":{"acc":"SRS396737","name":""},"Instrument":{"ILLUMINA":"Illumina HiSeq 2000"},"Library_descriptor":{"LIBRARY_NAME":"","LIBRARY_STRATEGY":"RNA-Seq","LIBRARY_SOURCE":"TRANSCRIPTOMIC","LIBRARY_SELECTION":"cDNA","LIBRARY_LAYOUT":{"PAIRED":{"NOMINAL_LENGTH":"300"}}},"Biosample":{"id":"1923029","acc":"SAMN01923029","sample_id":"474117","sample_acc":"SRS396737"},"Bioproject":"SRP018737"},"runs":{"Run":[{"acc":"SRR747855","total_spots":"182747799","total_bases":"36549559800","load_done":"true","is_public":"true","cluster_name":"public","static_data_available":"true"}]},"extlinks":" ","createdate":"2014/02/19","updatedate":"2013/02/20"} | ||
, | ||
{"uid":"785981","expxml":{"Summary":{"Title":"Whole transcriptome sequencing of Guillardia theta CCMP 2712 - MMETSP0046_2","Platform":{"_":"ILLUMINA","instrument_model":"Illumina HiSeq 2000"},"Statistics":{"total_runs":"1","total_spots":"21079444","total_bases":"4215888800","total_size":"2880906452","load_done":"true","cluster_name":"public"}},"Submitter":{"acc":"SRA166613","center_name":"NCGR","contact_name":"Kelly Schilling","lab_name":""},"Experiment":{"acc":"SRX549023","ver":"1","status":"public","name":"Whole transcriptome sequencing of Guillardia theta CCMP 2712 - MMETSP0046_2"},"Study":{"acc":"SRP042159","name":"Marine Microbial Eukaryote Transcriptome Sequencing Project"},"Organism":{"taxid":"55529","ScientificName":"Guillardia theta"},"Sample":{"acc":"SRS616861","name":""},"Instrument":{"ILLUMINA":"Illumina HiSeq 2000"},"Library_descriptor":{"LIBRARY_STRATEGY":"RNA-Seq","LIBRARY_SOURCE":"TRANSCRIPTOMIC","LIBRARY_SELECTION":"RANDOM PCR","LIBRARY_LAYOUT":{"PAIRED":""}},"Biosample":{"id":"2740393","acc":"SAMN02740393","sample_id":"801792","sample_acc":"SRS616861"},"Bioproject":"SRP042159"},"runs":{"Run":[{"acc":"SRR1294409","total_spots":"21079444","total_bases":"4215888800","load_done":"true","is_public":"true","cluster_name":"public","static_data_available":"true"}]},"extlinks":" ","createdate":"2014/06/07","updatedate":"2014/05/21"} | ||
{"uid":"35523","expxml":{"Summary":{"Title":"454 sequencing of Guillardia theta CCMP2712 random whole genome shotgun library.","Platform":{"_":"LS454","instrument_model":"454 GS FLX"},"Statistics":{"total_runs":"1","total_spots":"19695","total_bases":"5631540","total_size":"13923541","load_done":"true","static_data_available":"true","cluster_name":"public"}},"Submitter":{"acc":"SRA025478","center_name":"JGI","contact_name":"Sam Pitluck","lab_name":"PGF"},"Experiment":{"acc":"SRX029662","ver":"1","status":"public","name":"454 sequencing of Guillardia theta CCMP2712 random whole genome shotgun library."},"Study":{"acc":"SRP004020","name":"Guillardia theta CCMP2712"},"Organism":{"taxid":"905079","ScientificName":"Guillardia theta CCMP2712"},"Sample":{"acc":"SRS118433","name":""},"Instrument":{"LS454":"454 GS FLX"},"Library_descriptor":{"LIBRARY_NAME":"FTZB","LIBRARY_STRATEGY":"WGS","LIBRARY_SOURCE":"GENOMIC","LIBRARY_SELECTION":"RANDOM","LIBRARY_LAYOUT":{"SINGLE":""}},"Biosample":{"id":"116900","acc":"SAMN00116900","sample_id":"123602","sample_acc":"SRS118433"},"Bioproject":"SRP004020"},"runs":{"Run":[{"acc":"SRR070672","total_spots":"19695","total_bases":"5631540","load_done":"true","is_public":"true","cluster_name":"public","static_data_available":"true"}]},"extlinks":" ","createdate":"2011/10/29","updatedate":"2010/10/29"}, | ||
{"uid":"35524","expxml":{"Summary":{"Title":"454 sequencing of Guillardia theta CCMP2712 random whole genome shotgun library.","Platform":{"_":"LS454","instrument_model":"454 GS FLX"},"Statistics":{"total_runs":"1","total_spots":"204588","total_bases":"58208970","total_size":"146515335","load_done":"true","static_data_available":"true","cluster_name":"public"}},"Submitter":{"acc":"SRA025478","center_name":"JGI","contact_name":"Sam Pitluck","lab_name":"PGF"},"Experiment":{"acc":"SRX029663","ver":"1","status":"public","name":"454 sequencing of Guillardia theta CCMP2712 random whole genome shotgun library."},"Study":{"acc":"SRP004020","name":"Guillardia theta CCMP2712"},"Organism":{"taxid":"905079","ScientificName":"Guillardia theta CCMP2712"},"Sample":{"acc":"SRS118433","name":""},"Instrument":{"LS454":"454 GS FLX"},"Library_descriptor":{"LIBRARY_NAME":"FTZB","LIBRARY_STRATEGY":"WGS","LIBRARY_SOURCE":"GENOMIC","LIBRARY_SELECTION":"RANDOM","LIBRARY_LAYOUT":{"SINGLE":""}},"Biosample":{"id":"116900","acc":"SAMN00116900","sample_id":"123602","sample_acc":"SRS118433"},"Bioproject":"SRP004020"},"runs":{"Run":[{"acc":"SRR070673","total_spots":"204588","total_bases":"58208970","load_done":"true","is_public":"true","cluster_name":"public","static_data_available":"true"}]},"extlinks":" ","createdate":"2011/10/29","updatedate":"2010/10/29"}, | ||
{"uid":"35525","expxml":{"Summary":{"Title":"454 sequencing of Guillardia theta CCMP2712 random whole genome shotgun library.","Platform":{"_":"LS454","instrument_model":"454 GS FLX"},"Statistics":{"total_runs":"1","total_spots":"295457","total_bases":"85081326","total_size":"216274455","load_done":"true","static_data_available":"true","cluster_name":"public"}},"Submitter":{"acc":"SRA025478","center_name":"JGI","contact_name":"Sam Pitluck","lab_name":"PGF"},"Experiment":{"acc":"SRX029664","ver":"1","status":"public","name":"454 sequencing of Guillardia theta CCMP2712 random whole genome shotgun library."},"Study":{"acc":"SRP004020","name":"Guillardia theta CCMP2712"},"Organism":{"taxid":"905079","ScientificName":"Guillardia theta CCMP2712"},"Sample":{"acc":"SRS118433","name":""},"Instrument":{"LS454":"454 GS FLX"},"Library_descriptor":{"LIBRARY_NAME":"FTZB","LIBRARY_STRATEGY":"WGS","LIBRARY_SOURCE":"GENOMIC","LIBRARY_SELECTION":"RANDOM","LIBRARY_LAYOUT":{"SINGLE":""}},"Biosample":{"id":"116900","acc":"SAMN00116900","sample_id":"123602","sample_acc":"SRS118433"},"Bioproject":"SRP004020"},"runs":{"Run":[{"acc":"SRR070674","total_spots":"295457","total_bases":"85081326","load_done":"true","is_public":"true","cluster_name":"public","static_data_available":"true"}]},"extlinks":" ","createdate":"2011/10/29","updatedate":"2010/10/29"}, | ||
{"uid":"35526","expxml":{"Summary":{"Title":"454 sequencing of Guillardia theta CCMP2712 random whole genome shotgun library.","Platform":{"_":"LS454","instrument_model":"454 GS FLX"},"Statistics":{"total_runs":"1","total_spots":"11355","total_bases":"2962463","total_size":"7479863","load_done":"true","static_data_available":"true","cluster_name":"public"}},"Submitter":{"acc":"SRA025478","center_name":"JGI","contact_name":"Sam Pitluck","lab_name":"PGF"},"Experiment":{"acc":"SRX029665","ver":"1","status":"public","name":"454 sequencing of Guillardia theta CCMP2712 random whole genome shotgun library."},"Study":{"acc":"SRP004020","name":"Guillardia theta CCMP2712"},"Organism":{"taxid":"905079","ScientificName":"Guillardia theta CCMP2712"},"Sample":{"acc":"SRS118433","name":""},"Instrument":{"LS454":"454 GS FLX"},"Library_descriptor":{"LIBRARY_NAME":"FTZC","LIBRARY_STRATEGY":"WGS","LIBRARY_SOURCE":"GENOMIC","LIBRARY_SELECTION":"RANDOM","LIBRARY_LAYOUT":{"SINGLE":""}},"Biosample":{"id":"116900","acc":"SAMN00116900","sample_id":"123602","sample_acc":"SRS118433"},"Bioproject":"SRP004020"},"runs":{"Run":[{"acc":"SRR070675","total_spots":"11355","total_bases":"2962463","load_done":"true","is_public":"true","cluster_name":"public","static_data_available":"true"}]},"extlinks":" ","createdate":"2011/10/29","updatedate":"2010/10/29"}, | ||
{"uid":"35527","expxml":{"Summary":{"Title":"454 sequencing of Guillardia theta CCMP2712 random whole genome shotgun library.","Platform":{"_":"LS454","instrument_model":"454 GS FLX"},"Statistics":{"total_runs":"1","total_spots":"286676","total_bases":"72084130","total_size":"191124885","load_done":"true","static_data_available":"true","cluster_name":"public"}},"Submitter":{"acc":"SRA025478","center_name":"JGI","contact_name":"Sam Pitluck","lab_name":"PGF"},"Experiment":{"acc":"SRX029666","ver":"1","status":"public","name":"454 sequencing of Guillardia theta CCMP2712 random whole genome shotgun library."},"Study":{"acc":"SRP004020","name":"Guillardia theta CCMP2712"},"Organism":{"taxid":"905079","ScientificName":"Guillardia theta CCMP2712"},"Sample":{"acc":"SRS118433","name":""},"Instrument":{"LS454":"454 GS FLX"},"Library_descriptor":{"LIBRARY_NAME":"FTZC","LIBRARY_STRATEGY":"WGS","LIBRARY_SOURCE":"GENOMIC","LIBRARY_SELECTION":"RANDOM","LIBRARY_LAYOUT":{"SINGLE":""}},"Biosample":{"id":"116900","acc":"SAMN00116900","sample_id":"123602","sample_acc":"SRS118433"},"Bioproject":"SRP004020"},"runs":{"Run":[{"acc":"SRR070676","total_spots":"286676","total_bases":"72084130","load_done":"true","is_public":"true","cluster_name":"public","static_data_available":"true"}]},"extlinks":" ","createdate":"2011/10/29","updatedate":"2010/10/29"}, | ||
{"uid":"35528","expxml":{"Summary":{"Title":"454 sequencing of Guillardia theta CCMP2712 random whole genome shotgun library.","Platform":{"_":"LS454","instrument_model":"454 GS FLX"},"Statistics":{"total_runs":"1","total_spots":"971916","total_bases":"513131403","total_size":"1174625556","load_done":"true","static_data_available":"true","cluster_name":"public"}},"Submitter":{"acc":"SRA025478","center_name":"JGI","contact_name":"Sam Pitluck","lab_name":"PGF"},"Experiment":{"acc":"SRX029667","ver":"1","status":"public","name":"454 sequencing of Guillardia theta CCMP2712 random whole genome shotgun library."},"Study":{"acc":"SRP004020","name":"Guillardia theta CCMP2712"},"Organism":{"taxid":"905079","ScientificName":"Guillardia theta CCMP2712"},"Sample":{"acc":"SRS118433","name":""},"Instrument":{"LS454":"454 GS FLX"},"Library_descriptor":{"LIBRARY_NAME":"GGAN","LIBRARY_STRATEGY":"WGS","LIBRARY_SOURCE":"GENOMIC","LIBRARY_SELECTION":"RANDOM","LIBRARY_LAYOUT":{"SINGLE":""}},"Biosample":{"id":"116900","acc":"SAMN00116900","sample_id":"123602","sample_acc":"SRS118433"},"Bioproject":"SRP004020"},"runs":{"Run":[{"acc":"SRR070677","total_spots":"971916","total_bases":"513131403","load_done":"true","is_public":"true","cluster_name":"public","static_data_available":"true"}]},"extlinks":" ","createdate":"2011/10/29","updatedate":"2010/10/29"}, | ||
{"uid":"35529","expxml":{"Summary":{"Title":"454 sequencing of Guillardia theta CCMP2712 random whole genome shotgun library.","Platform":{"_":"LS454","instrument_model":"454 GS FLX"},"Statistics":{"total_runs":"1","total_spots":"1131540","total_bases":"588220300","total_size":"1327676112","load_done":"true","static_data_available":"true","cluster_name":"public"}},"Submitter":{"acc":"SRA025478","center_name":"JGI","contact_name":"Sam Pitluck","lab_name":"PGF"},"Experiment":{"acc":"SRX029668","ver":"1","status":"public","name":"454 sequencing of Guillardia theta CCMP2712 random whole genome shotgun library."},"Study":{"acc":"SRP004020","name":"Guillardia theta CCMP2712"},"Organism":{"taxid":"905079","ScientificName":"Guillardia theta CCMP2712"},"Sample":{"acc":"SRS118433","name":""},"Instrument":{"LS454":"454 GS FLX"},"Library_descriptor":{"LIBRARY_NAME":"GGAN","LIBRARY_STRATEGY":"WGS","LIBRARY_SOURCE":"GENOMIC","LIBRARY_SELECTION":"RANDOM","LIBRARY_LAYOUT":{"SINGLE":""}},"Biosample":{"id":"116900","acc":"SAMN00116900","sample_id":"123602","sample_acc":"SRS118433"},"Bioproject":"SRP004020"},"runs":{"Run":[{"acc":"SRR070678","total_spots":"1131540","total_bases":"588220300","load_done":"true","is_public":"true","cluster_name":"public","static_data_available":"true"}]},"extlinks":" ","createdate":"2011/10/29","updatedate":"2010/10/29"}, | ||
{"uid":"35530","expxml":{"Summary":{"Title":"454 sequencing of Guillardia theta CCMP2712 random whole genome shotgun library.","Platform":{"_":"LS454","instrument_model":"454 GS FLX"},"Statistics":{"total_runs":"1","total_spots":"875108","total_bases":"467593710","total_size":"1055151585","load_done":"true","static_data_available":"true","cluster_name":"public"}},"Submitter":{"acc":"SRA025478","center_name":"JGI","contact_name":"Sam Pitluck","lab_name":"PGF"},"Experiment":{"acc":"SRX029669","ver":"1","status":"public","name":"454 sequencing of Guillardia theta CCMP2712 random whole genome shotgun library."},"Study":{"acc":"SRP004020","name":"Guillardia theta CCMP2712"},"Organism":{"taxid":"905079","ScientificName":"Guillardia theta CCMP2712"},"Sample":{"acc":"SRS118433","name":""},"Instrument":{"LS454":"454 GS FLX"},"Library_descriptor":{"LIBRARY_NAME":"GGAN","LIBRARY_STRATEGY":"WGS","LIBRARY_SOURCE":"GENOMIC","LIBRARY_SELECTION":"RANDOM","LIBRARY_LAYOUT":{"SINGLE":""}},"Biosample":{"id":"116900","acc":"SAMN00116900","sample_id":"123602","sample_acc":"SRS118433"},"Bioproject":"SRP004020"},"runs":{"Run":[{"acc":"SRR070679","total_spots":"875108","total_bases":"467593710","load_done":"true","is_public":"true","cluster_name":"public","static_data_available":"true"}]},"extlinks":" ","createdate":"2011/10/29","updatedate":"2010/10/29"}, | ||
{"uid":"35531","expxml":{"Summary":{"Title":"454 sequencing of Guillardia theta CCMP2712 random whole genome shotgun library.","Platform":{"_":"LS454","instrument_model":"454 GS FLX"},"Statistics":{"total_runs":"1","total_spots":"1277503","total_bases":"657634727","total_size":"1479299694","load_done":"true","static_data_available":"true","cluster_name":"public"}},"Submitter":{"acc":"SRA025478","center_name":"JGI","contact_name":"Sam Pitluck","lab_name":"PGF"},"Experiment":{"acc":"SRX029670","ver":"1","status":"public","name":"454 sequencing of Guillardia theta CCMP2712 random whole genome shotgun library."},"Study":{"acc":"SRP004020","name":"Guillardia theta CCMP2712"},"Organism":{"taxid":"905079","ScientificName":"Guillardia theta CCMP2712"},"Sample":{"acc":"SRS118433","name":""},"Instrument":{"LS454":"454 GS FLX"},"Library_descriptor":{"LIBRARY_NAME":"GGAN","LIBRARY_STRATEGY":"WGS","LIBRARY_SOURCE":"GENOMIC","LIBRARY_SELECTION":"RANDOM","LIBRARY_LAYOUT":{"SINGLE":""}},"Biosample":{"id":"116900","acc":"SAMN00116900","sample_id":"123602","sample_acc":"SRS118433"},"Bioproject":"SRP004020"},"runs":{"Run":[{"acc":"SRR070680","total_spots":"1277503","total_bases":"657634727","load_done":"true","is_public":"true","cluster_name":"public","static_data_available":"true"}]},"extlinks":" ","createdate":"2011/10/29","updatedate":"2010/10/29"}, | ||
{"uid":"35532","expxml":{"Summary":{"Title":"454 sequencing of Guillardia theta CCMP2712 random whole genome shotgun library.","Platform":{"_":"LS454","instrument_model":"454 GS FLX"},"Statistics":{"total_runs":"1","total_spots":"873145","total_bases":"341989978","total_size":"860077955","load_done":"true","static_data_available":"true","cluster_name":"public"}},"Submitter":{"acc":"SRA025478","center_name":"JGI","contact_name":"Sam Pitluck","lab_name":"PGF"},"Experiment":{"acc":"SRX029671","ver":"1","status":"public","name":"454 sequencing of Guillardia theta CCMP2712 random whole genome shotgun library."},"Study":{"acc":"SRP004020","name":"Guillardia theta CCMP2712"},"Organism":{"taxid":"905079","ScientificName":"Guillardia theta CCMP2712"},"Sample":{"acc":"SRS118433","name":""},"Instrument":{"LS454":"454 GS FLX"},"Library_descriptor":{"LIBRARY_NAME":"GPNF","LIBRARY_STRATEGY":"WGS","LIBRARY_SOURCE":"GENOMIC","LIBRARY_SELECTION":"RANDOM","LIBRARY_LAYOUT":{"SINGLE":""}},"Biosample":{"id":"116900","acc":"SAMN00116900","sample_id":"123602","sample_acc":"SRS118433"},"Bioproject":"SRP004020"},"runs":{"Run":[{"acc":"SRR070681","total_spots":"873145","total_bases":"341989978","load_done":"true","is_public":"true","cluster_name":"public","static_data_available":"true"}]},"extlinks":" ","createdate":"2011/10/29","updatedate":"2010/10/29"}, | ||
{"uid":"35533","expxml":{"Summary":{"Title":"454 sequencing of Guillardia theta CCMP2712 random whole genome shotgun library.","Platform":{"_":"LS454","instrument_model":"454 GS FLX"},"Statistics":{"total_runs":"1","total_spots":"853766","total_bases":"335390762","total_size":"847553880","load_done":"true","static_data_available":"true","cluster_name":"public"}},"Submitter":{"acc":"SRA025478","center_name":"JGI","contact_name":"Sam Pitluck","lab_name":"PGF"},"Experiment":{"acc":"SRX029672","ver":"1","status":"public","name":"454 sequencing of Guillardia theta CCMP2712 random whole genome shotgun library."},"Study":{"acc":"SRP004020","name":"Guillardia theta CCMP2712"},"Organism":{"taxid":"905079","ScientificName":"Guillardia theta CCMP2712"},"Sample":{"acc":"SRS118433","name":""},"Instrument":{"LS454":"454 GS FLX"},"Library_descriptor":{"LIBRARY_NAME":"GPNF","LIBRARY_STRATEGY":"WGS","LIBRARY_SOURCE":"GENOMIC","LIBRARY_SELECTION":"RANDOM","LIBRARY_LAYOUT":{"SINGLE":""}},"Biosample":{"id":"116900","acc":"SAMN00116900","sample_id":"123602","sample_acc":"SRS118433"},"Bioproject":"SRP004020"},"runs":{"Run":[{"acc":"SRR070682","total_spots":"853766","total_bases":"335390762","load_done":"true","is_public":"true","cluster_name":"public","static_data_available":"true"}]},"extlinks":" ","createdate":"2011/10/29","updatedate":"2010/10/29"}, | ||
{"uid":"333627","expxml":{"Summary":{"Title":"Guillardia theta CCMP2712 Transcriptome","Platform":{"_":"ILLUMINA","instrument_model":"Illumina HiSeq 2000"},"Statistics":{"total_runs":"1","total_spots":"182747799","total_bases":"36549559800","total_size":"22708555668","load_done":"true","cluster_name":"public"}},"Submitter":{"acc":"SRA067334","center_name":"Dalhousie University","contact_name":"Naoko Tanifuji","lab_name":"John Archibald"},"Experiment":{"acc":"SRX242847","ver":"1","status":"public","name":"Guillardia theta CCMP2712 Transcriptome"},"Study":{"acc":"SRP018737","name":"Guillardia theta CCMP2712Transcriptome or Gene expression"},"Organism":{"taxid":"905079","ScientificName":"Guillardia theta CCMP2712"},"Sample":{"acc":"SRS396737","name":""},"Instrument":{"ILLUMINA":"Illumina HiSeq 2000"},"Library_descriptor":{"LIBRARY_NAME":"","LIBRARY_STRATEGY":"RNA-Seq","LIBRARY_SOURCE":"TRANSCRIPTOMIC","LIBRARY_SELECTION":"cDNA","LIBRARY_LAYOUT":{"PAIRED":{"NOMINAL_LENGTH":"300"}}},"Biosample":{"id":"1923029","acc":"SAMN01923029","sample_id":"474117","sample_acc":"SRS396737"},"Bioproject":"SRP018737"},"runs":{"Run":[{"acc":"SRR747855","total_spots":"182747799","total_bases":"36549559800","load_done":"true","is_public":"true","cluster_name":"public","static_data_available":"true"}]},"extlinks":" ","createdate":"2014/02/19","updatedate":"2013/02/20"}, | ||
{"uid":"785981","expxml":{"Summary":{"Title":"Whole transcriptome sequencing of Guillardia theta CCMP 2712 - MMETSP0046_2","Platform":{"_":"ILLUMINA","instrument_model":"Illumina HiSeq 2000"},"Statistics":{"total_runs":"1","total_spots":"21079444","total_bases":"4215888800","total_size":"2880906452","load_done":"true","cluster_name":"public"}},"Submitter":{"acc":"SRA166613","center_name":"NCGR","contact_name":"Kelly Schilling","lab_name":""},"Experiment":{"acc":"SRX549023","ver":"1","status":"public","name":"Whole transcriptome sequencing of Guillardia theta CCMP 2712 - MMETSP0046_2"},"Study":{"acc":"SRP042159","name":"Marine Microbial Eukaryote Transcriptome Sequencing Project"},"Organism":{"taxid":"55529","ScientificName":"Guillardia theta"},"Sample":{"acc":"SRS616861","name":""},"Instrument":{"ILLUMINA":"Illumina HiSeq 2000"},"Library_descriptor":{"LIBRARY_STRATEGY":"RNA-Seq","LIBRARY_SOURCE":"TRANSCRIPTOMIC","LIBRARY_SELECTION":"RANDOM PCR","LIBRARY_LAYOUT":{"PAIRED":""}},"Biosample":{"id":"2740393","acc":"SAMN02740393","sample_id":"801792","sample_acc":"SRS616861"},"Bioproject":"SRP042159"},"runs":{"Run":[{"acc":"SRR1294409","total_spots":"21079444","total_bases":"4215888800","load_done":"true","is_public":"true","cluster_name":"public","static_data_available":"true"}]},"extlinks":" ","createdate":"2014/06/07","updatedate":"2014/05/21"} | ||
] |
License Policy Violation
LicenseThis package is not allowed per your license policy. Review the package's license to ensure compliance.
Found 1 instance in 1 package
License Policy Violation
LicenseThis package is not allowed per your license policy. Review the package's license to ensure compliance.
Found 1 instance in 1 package
1177417
4351