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bionode-ncbi

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bionode-ncbi - npm Package Compare versions

Comparing version 0.6.1 to 0.6.2

2

package.json
{
"name": "bionode-ncbi",
"description": "Node.js module for working with the NCBI API (aka e-utils) using Streams.",
"version": "0.6.1",
"version": "0.6.2",
"homepage": "http://github.com/bionode/bionode-ncbi",

@@ -6,0 +6,0 @@ "repository": {

@@ -82,3 +82,8 @@ var fs = require('fs')

var msg = 'same as previous but with a limit of 1'
t.deepEqual(results2, [guillardiaThetaSRAData[11]], msg)
guillardiaThetaSRAData.forEach(findMatchAndTest)
function findMatchAndTest(sradata) {
if (sradata.uid === results2[0].uid) {
t.deepEqual(results2, [sradata], msg)
}
}
})

@@ -85,0 +90,0 @@

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,
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,
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,
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,
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,
{"uid":"333627","expxml":{"Summary":{"Title":"Guillardia theta CCMP2712 Transcriptome","Platform":{"_":"ILLUMINA","instrument_model":"Illumina HiSeq 2000"},"Statistics":{"total_runs":"1","total_spots":"182747799","total_bases":"36549559800","total_size":"22708555668","load_done":"true","cluster_name":"public"}},"Submitter":{"acc":"SRA067334","center_name":"Dalhousie University","contact_name":"Naoko Tanifuji","lab_name":"John Archibald"},"Experiment":{"acc":"SRX242847","ver":"1","status":"public","name":"Guillardia theta CCMP2712 Transcriptome"},"Study":{"acc":"SRP018737","name":"Guillardia theta strain:CCMP2712 Transcriptome or Gene expression"},"Organism":{"taxid":"905079","ScientificName":"Guillardia theta CCMP2712"},"Sample":{"acc":"SRS396737","name":""},"Instrument":{"ILLUMINA":"Illumina HiSeq 2000"},"Library_descriptor":{"LIBRARY_NAME":"","LIBRARY_STRATEGY":"RNA-Seq","LIBRARY_SOURCE":"TRANSCRIPTOMIC","LIBRARY_SELECTION":"cDNA","LIBRARY_LAYOUT":{"PAIRED":{"NOMINAL_LENGTH":"300"}}},"Biosample":{"id":"1923029","acc":"SAMN01923029","sample_id":"474117","sample_acc":"SRS396737"},"Bioproject":"SRP018737"},"runs":{"Run":[{"acc":"SRR747855","total_spots":"182747799","total_bases":"36549559800","load_done":"true","is_public":"true","cluster_name":"public","static_data_available":"true"}]},"extlinks":" ","createdate":"2014/02/19","updatedate":"2013/02/20"}
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{"uid":"785981","expxml":{"Summary":{"Title":"Whole transcriptome sequencing of Guillardia theta CCMP 2712 - MMETSP0046_2","Platform":{"_":"ILLUMINA","instrument_model":"Illumina HiSeq 2000"},"Statistics":{"total_runs":"1","total_spots":"21079444","total_bases":"4215888800","total_size":"2880906452","load_done":"true","cluster_name":"public"}},"Submitter":{"acc":"SRA166613","center_name":"NCGR","contact_name":"Kelly Schilling","lab_name":""},"Experiment":{"acc":"SRX549023","ver":"1","status":"public","name":"Whole transcriptome sequencing of Guillardia theta CCMP 2712 - MMETSP0046_2"},"Study":{"acc":"SRP042159","name":"Marine Microbial Eukaryote Transcriptome Sequencing Project"},"Organism":{"taxid":"55529","ScientificName":"Guillardia theta"},"Sample":{"acc":"SRS616861","name":""},"Instrument":{"ILLUMINA":"Illumina HiSeq 2000"},"Library_descriptor":{"LIBRARY_STRATEGY":"RNA-Seq","LIBRARY_SOURCE":"TRANSCRIPTOMIC","LIBRARY_SELECTION":"RANDOM PCR","LIBRARY_LAYOUT":{"PAIRED":""}},"Biosample":{"id":"2740393","acc":"SAMN02740393","sample_id":"801792","sample_acc":"SRS616861"},"Bioproject":"SRP042159"},"runs":{"Run":[{"acc":"SRR1294409","total_spots":"21079444","total_bases":"4215888800","load_done":"true","is_public":"true","cluster_name":"public","static_data_available":"true"}]},"extlinks":" ","createdate":"2014/06/07","updatedate":"2014/05/21"}
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]
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