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gramene-bedify

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    gramene-bedify

transforms gramene JSON genes into tab delimited bed


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gramene-bedify

Convert gramene gene JSON documents into tab delimited bed format. Two parameters, bedFeature and bedCombiner define the behavior.

bedFeature defaults to 'gene', but other options include: 'exon', 'intron', 'CDS', 'utr5', or 'utr3' bedCombiner defaults to 'canonical', but 'all' is available too

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Last updated on 27 Mar 2017

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