connectome-interpreter
Advanced tools
This package is intended to be used for interpreting connectomics data.
To install:
pip install connectome-interpreter
Documentation here (with some text snippets explaining various things).
Data obtained from Dorkenwald et al. 2023 and Schlegel et al. 2023. To visualise the neurons, you can use this url: https://tinyurl.com/flywire783. By using the connectivity information, you agree to follow the FlyWire citation guidelines and principles.
Data obtained from neuPrint and Nern et al. 2024, with the help of neuprint-python.
Data from Winding et al. 2023. You can also e.g. visualise the neurons in 3D in catmaid.
scipy.sparse.matrix (.npz) format for the adjacency matrices; and in .csv for the metadata.yy432atcam.ac.uk :).FAQs
A tool for connectomics data interpretation
We found that connectome-interpreter demonstrated a healthy version release cadence and project activity because the last version was released less than a year ago. It has 1 open source maintainer collaborating on the project.
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