@datagrok-libraries/bio - npm Package Compare versions

Comparing version 2.8.6 to 2.8.7

package.json

@@ -8,3 +8,3 @@ {
   "friendlyName": "Datagrok bio library",
-  "version": "2.8.6",
+  "version": "2.8.7",
   "description": "",
@@ -33,10 +33,10 @@ "dependencies": {
     "link-all": "npm link datagrok-api @datagrok-libraries/utils",
-    "debug-bio": "grok publish --rebuild",
-    "release-bio": "grok publish --rebuild --release",
+    "debug-bio": "grok publish",
+    "release-bio": "grok publish --release",
     "build-bio": "tsc",
     "build": "tsc",
-    "debug-bio-public": "grok publish public --rebuild",
-    "release-bio-public": "grok publish public --rebuild --release",
-    "debug-bio-local": "grok publish local --rebuild",
-    "release-bio-local": "grok publish local --rebuild --release",
+    "debug-bio-public": "grok publish public",
+    "release-bio-public": "grok publish public --release",
+    "debug-bio-local": "grok publish local",
+    "release-bio-local": "grok publish local --release",
     "lint": "eslint \"./src/**/*.ts\"",
@@ -43,0 +43,0 @@ "lint-fix": "eslint \"./src/**/*.ts\" --fix"

src/utils/units-handler.d.ts

@@ -19,2 +19,6 @@ import * as DG from 'datagrok-api/dg';
     };
+    static readonly PeptideFastaAlphabet: Set<string>;
+    static readonly DnaFastaAlphabet: Set<string>;
+    static readonly RnaFastaAlphabet: Set<string>;
+    static setUnitsToFastaColumn(col: DG.Column): void;
     protected get units(): string;
@@ -21,0 +25,0 @@ protected get column(): DG.Column;

src/utils/units-handler.js

 import * as DG from 'datagrok-api/dg';
+import { WebLogo } from '../viewers/web-logo';
 /** Class for handling notation units in Macromolecule columns */
@@ -21,2 +22,19 @@ export class UnitsHandler {
     }
+    static setUnitsToFastaColumn(col) {
+        if (col.semType !== DG.SEMTYPE.MACROMOLECULE)
+            throw new Error('Fasta column must be MACROMOLECULE');
+        const stats = WebLogo.getStats(col, 5, WebLogo.splitterAsFasta);
+        const seqType = stats.sameLength ? 'SEQ.MSA' : 'SEQ';
+        const alphabetCandidates = [
+            ['PT', UnitsHandler.PeptideFastaAlphabet],
+            ['DNA', UnitsHandler.DnaFastaAlphabet],
+            ['RNA', UnitsHandler.RnaFastaAlphabet],
+        ];
+        // Calculate likelihoods for alphabet_candidates
+        const alphabetCandidatesSim = alphabetCandidates.map((c) => WebLogo.getAlphabetSimilarity(stats.freq, c[1]));
+        const maxCos = Math.max(...alphabetCandidatesSim);
+        const alphabet = maxCos > 0.65 ? alphabetCandidates[alphabetCandidatesSim.indexOf(maxCos)][0] : 'UN';
+        const units = `fasta:${seqType}:${alphabet}`;
+        col.setTag(DG.TAGS.UNITS, units);
+    }
     get units() { return this._units; }
@@ -118,2 +136,8 @@ get column() { return this._column; }
 }
-//# sourceMappingURL=data:application/json;base64,{"version":3,"file":"units-handler.js","sourceRoot":"","sources":["units-handler.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,MAAM,iBAAiB,CAAC;AAWtC,iEAAiE;AACjE,MAAM,OAAO,YAAY;IAsIvB,YAAmB,GAAc;QAjIvB,2BAAsB,GAAG;YACjC,IAAI,EAAE,GAAG;YACT,SAAS,EAAE,EAAE;YACb,KAAK,EAAE,GAAG;SACX,CAAC;QA8HA,IAAI,CAAC,OAAO,GAAG,GAAG,CAAC;QACnB,MAAM,KAAK,GAAG,IAAI,CAAC,OAAO,CAAC,IAAI,CAAC,EAAE,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC;QAC/C,IAAI,KAAK,KAAK,IAAI;YAChB,IAAI,CAAC,MAAM,GAAG,KAAK,CAAC;;YAEpB,MAAM,IAAI,KAAK,CAAC,mCAAmC,CAAC,CAAC;QACvD,IAAI,CAAC,SAAS,GAAG,IAAI,CAAC,WAAW,EAAE,CAAC;QACpC,IAAI,CAAC,iBAAiB,GAAG,CAAC,IAAI,CAAC,OAAO,EAAE,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,sBAAsB,CAAC,KAAK,CAAC,CAAC;YAC7E,CAAC,IAAI,CAAC,MAAM,EAAE,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,sBAAsB,CAAC,IAAI,CAAC,CAAC;gBAClD,IAAI,CAAC,sBAAsB,CAAC,SAAS,CAAC;IAC5C,CAAC;IAtID,IAAc,KAAK,KAAa,OAAO,IAAI,CAAC,MAAM,CAAC,CAAC,CAAC;IAErD,IAAc,MAAM,KAAgB,OAAO,IAAI,CAAC,OAAO,CAAC,CAAC,CAAC;IAE1D,IAAW,QAAQ,KAAe,OAAO,IAAI,CAAC,SAAS,CAAC,CAAC,CAAC;IAE1D,IAAW,gBAAgB,KAAa,OAAO,IAAI,CAAC,iBAAiB,CAAC,CAAC,CAAC;IAExE,IAAW,SAAS;QAClB,MAAM,SAAS,GAAG,IAAI,CAAC,MAAM,CAAC,MAAM,CAAC,WAAW,CAAC,CAAC;QAClD,IAAI,SAAS,KAAK,IAAI;YACpB,OAAO,SAAS,CAAC;;YAEjB,MAAM,IAAI,KAAK,CAAC,mBAAmB,CAAC,CAAC;IACzC,CAAC;IAEM,OAAO,KAAc,OAAO,IAAI,CAAC,QAAQ,iCAAmB,CAAC,CAAC,CAAC;IAE/D,WAAW,KAAc,OAAO,IAAI,CAAC,QAAQ,yCAAuB,CAAC,CAAC,CAAC;IAEvE,MAAM,KAAc,OAAO,IAAI,CAAC,QAAQ,+BAAkB,CAAC,CAAC,CAAC;IAE7D,KAAK,KAAc,OAAO,IAAI,CAAC,KAAK,CAAC,WAAW,EAAE,CAAC,QAAQ,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC;IAErE,KAAK,KAAc,OAAO,IAAI,CAAC,KAAK,CAAC,WAAW,EAAE,CAAC,QAAQ,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC;IAErE,SAAS,KAAc,OAAO,IAAI,CAAC,KAAK,CAAC,WAAW,EAAE,CAAC,QAAQ,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;IAE/E,4DAA4D;IAC5D;;OAEG;IACO,WAAW;QACnB,IAAI,IAAI,CAAC,KAAK,CAAC,WAAW,EAAE,CAAC,UAAU,CAAC,OAAO,CAAC;YAC9C,oCAAsB;aACnB,IAAI,IAAI,CAAC,KAAK,CAAC,WAAW,EAAE,CAAC,UAAU,CAAC,WAAW,CAAC;YACvD,4CAA0B;aACvB,IAAI,IAAI,CAAC,KAAK,CAAC,WAAW,EAAE,CAAC,UAAU,CAAC,MAAM,CAAC;YAClD,kCAAqB;;YAErB,MAAM,IAAI,KAAK,CAAC,6DAA6D,CAAC,CAAC;IACnF,CAAC;IAED;;;;;;OAMG;IACO,YAAY,CAAC,cAAwB;QAC7C,MAAM,GAAG,GAAG,IAAI,CAAC,MAAM,CAAC;QACxB,MAAM,GAAG,GAAG,GAAG,CAAC,MAAM,CAAC;QACvB,MAAM,IAAI,GAAG,cAAc,CAAC,WAAW,EAAE,GAAG,GAAG,GAAG,GAAG,CAAC,IAAI,GAAG,GAAG,CAAC;QACjE,MAAM,UAAU,GAAG,GAAG,CAAC,SAAS,CAAC,OAAO,CAAC,aAAa,CAAC,IAAI,CAAC,CAAC;QAC7D,MAAM,SAAS,GAAG,EAAE,CAAC,MAAM,CAAC,QAAQ,CAAC,QAAQ,EAAE,UAAU,EAAE,IAAI,KAAK,CAAC,GAAG,CAAC,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC,CAAC;QACpF,SAAS,CAAC,OAAO,GAAG,EAAE,CAAC,OAAO,CAAC,aAAa,CAAC;QAC7C,SAAS,CAAC,MAAM,CACd,EAAE,CAAC,IAAI,CAAC,KAAK,EACb,IAAI,CAAC,KAAK,CAAC,OAAO,CAChB,IAAI,CAAC,QAAQ,CAAC,WAAW,EAAE,CAAC,QAAQ,EAAE,EACtC,cAAc,CAAC,WAAW,EAAE,CAAC,QAAQ,EAAE,CACxC,CACF,CAAC;QACF,SAAS,CAAC,MAAM,CAAC,EAAE,CAAC,IAAI,CAAC,aAAa,EAAE,eAAe,CAAC,CAAC;QAEzD,OAAO,SAAS,CAAC;IACnB,CAAC;IAED;;;;;;OAMG;IACI,MAAM,CAAC,YAAY,CAAC,WAAsB;QAC/C,MAAM,GAAG,GAAiB,IAAI,YAAY,CAAC,WAAW,CAAC,CAAC;QACxD,MAAM,cAAc,GAAG,GAAG,CAAC,QAAQ,CAAC;QACpC,OAAO,GAAG,CAAC,YAAY,CAAC,cAAc,CAAC,CAAC;IAC1C,CAAC;IAED;;;;;OAKG;IACI,MAAM,CAAC,kBAAkB,CAAC,KAAa;QAC5C,KAAK,GAAG,KAAK,CAAC,WAAW,EAAE,CAAC;QAC5B,MAAM,QAAQ,GAAG,gGAAmD,CAAC;QACrE,MAAM,SAAS,GAAG,CAAC,KAAK,EAAE,KAAK,EAAE,IAAI,CAAC,CAAC;QAEvC,MAAM,eAAe,GAAG,QAAQ,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,KAAK,CAAC,UAAU,CAAC,CAAC,CAAC,WAAW,EAAE,CAAC,CAAC,CAAC;QAChF,MAAM,gBAAgB,GAAG,SAAS,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,KAAK,CAAC,QAAQ,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,qBAAqB;QACxF,OAAO,eAAe,IAAI,gBAAgB,CAAC;IAC7C,CAAC;IAED;;;;;;;;OAQG;IACI,MAAM,CAAC,sBAAsB,CAClC,GAAW,EACX,IAAY,EACZ,KAAa;QAEb,4EAA4E;QAC5E,2BAA2B;QAC3B,+CAA+C;QAC/C,IAAI,CAAC,YAAY,CAAC,kBAAkB,CAAC,KAAK,CAAC;YACzC,MAAM,IAAI,KAAK,CAAC,uCAAuC,CAAC,CAAC;QAC3D,MAAM,SAAS,GAAG,EAAE,CAAC,MAAM,CAAC,QAAQ,CAAC,QAAQ,EAAE,IAAI,EAAE,IAAI,KAAK,CAAC,GAAG,CAAC,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC,CAAC;QAC9E,SAAS,CAAC,OAAO,GAAG,EAAE,CAAC,OAAO,CAAC,aAAa,CAAC;QAC7C,SAAS,CAAC,MAAM,CAAC,EAAE,CAAC,IAAI,CAAC,KAAK,EAAE,KAAK,CAAC,CAAC;QACvC,OAAO,SAAS,CAAC;IACnB,CAAC;CAcF","sourcesContent":["import * as DG from 'datagrok-api/dg';\nimport * as ui from 'datagrok-api/ui';\nimport * as grok from 'datagrok-api/grok';\n\n/** enum type to simplify setting \"user-friendly\" notation if necessary */\nexport const enum NOTATION {\n  FASTA = 'FASTA',\n  SEPARATOR = 'SEPARATOR',\n  HELM = 'HELM'\n}\n\n/** Class for handling notation units in Macromolecule columns */\nexport class UnitsHandler {\n  protected readonly _column: DG.Column; // the column to be converted\n  protected _units: string; // units, of the form fasta:SEQ:NT, etc.\n  protected _notation: NOTATION; // current notation (without :SEQ:NT, etc.)\n  protected _defaultGapSymbol: string;\n  protected _defaultGapSymbolsDict = {\n    HELM: '*',\n    SEPARATOR: '',\n    FASTA: '-',\n  };\n\n  protected get units(): string { return this._units; }\n\n  protected get column(): DG.Column { return this._column; }\n\n  public get notation(): NOTATION { return this._notation; }\n\n  public get defaultGapSymbol(): string { return this._defaultGapSymbol; }\n\n  public get separator(): string {\n    const separator = this.column.getTag('separator');\n    if (separator !== null)\n      return separator;\n    else\n      throw new Error('Separator not set');\n  }\n\n  public isFasta(): boolean { return this.notation === NOTATION.FASTA; }\n\n  public isSeparator(): boolean { return this.notation === NOTATION.SEPARATOR; }\n\n  public isHelm(): boolean { return this.notation === NOTATION.HELM; }\n\n  public isRna(): boolean { return this.units.toLowerCase().endsWith('rna'); }\n\n  public isDna(): boolean { return this.units.toLowerCase().endsWith('dna'); }\n\n  public isPeptide(): boolean { return this.units.toLowerCase().endsWith('pt'); }\n\n  /** Associate notation types with the corresponding units */\n  /**\n   * @return {NOTATION}     Notation associated with the units type\n   */\n  protected getNotation(): NOTATION {\n    if (this.units.toLowerCase().startsWith('fasta'))\n      return NOTATION.FASTA;\n    else if (this.units.toLowerCase().startsWith('separator'))\n      return NOTATION.SEPARATOR;\n    else if (this.units.toLowerCase().startsWith('helm'))\n      return NOTATION.HELM;\n    else\n      throw new Error('The column has units that do not correspond to any notation');\n  }\n\n  /**\n   * Create a new empty column of the specified notation type and the same\n   * length as column\n   *\n   * @param {NOTATION} targetNotation\n   * @return {DG.Column}\n   */\n  protected getNewColumn(targetNotation: NOTATION): DG.Column {\n    const col = this.column;\n    const len = col.length;\n    const name = targetNotation.toLowerCase() + '(' + col.name + ')';\n    const newColName = col.dataFrame.columns.getUnusedName(name);\n    const newColumn = DG.Column.fromList('string', newColName, new Array(len).fill(''));\n    newColumn.semType = DG.SEMTYPE.MACROMOLECULE;\n    newColumn.setTag(\n      DG.TAGS.UNITS,\n      this.units.replace(\n        this.notation.toLowerCase().toString(),\n        targetNotation.toLowerCase().toString()\n      )\n    );\n    newColumn.setTag(DG.TAGS.CELL_RENDERER, 'Macromolecule');\n\n    return newColumn;\n  }\n\n  /**\n   * Create a new empty column using templateCol as a template\n   *\n   * @param {DG.Column} templateCol  the properties and units of this column are used as a\n   * template to build the new one\n   * @return {DG.Column}\n   */\n  public static getNewColumn(templateCol: DG.Column): DG.Column {\n    const col: UnitsHandler = new UnitsHandler(templateCol);\n    const targetNotation = col.notation;\n    return col.getNewColumn(targetNotation);\n  }\n\n  /**\n   * A helper function checking the validity of the 'units' string\n   *\n   * @param {string} units  the string to be validated\n   * @return {boolean}\n   */\n  public static unitsStringIsValid(units: string): boolean {\n    units = units.toLowerCase();\n    const prefixes = [NOTATION.FASTA, NOTATION.SEPARATOR, NOTATION.HELM];\n    const postfixes = ['rna', 'dna', 'pt'];\n\n    const prefixCriterion = prefixes.some((p) => units.startsWith(p.toLowerCase()));\n    const postfixCriterion = postfixes.some((p) => units.endsWith(p)); // already lowercase;\n    return prefixCriterion && postfixCriterion;\n  }\n\n  /**\n   * Construct a new column of semantic type MACROMOLECULE from the list of\n   * specified parameters\n   *\n   * @param {number}    len  the length of the new column\n   * @param {string}    name  the name of the new column\n   * @param {string}    units  the units of the new column\n   * @return {DG.Column}\n   */\n  public static getNewColumnFromParams(\n    len: number,\n    name: string,\n    units: string\n  ): DG.Column {\n    // WARNING: in this implementation is is impossible to verify the uniqueness\n    // of the new column's name\n    // TODO: verify the validity of units parameter\n    if (!UnitsHandler.unitsStringIsValid(units))\n      throw new Error('Invalid format of \\'units\\' parameter');\n    const newColumn = DG.Column.fromList('string', name, new Array(len).fill(''));\n    newColumn.semType = DG.SEMTYPE.MACROMOLECULE;\n    newColumn.setTag(DG.TAGS.UNITS, units);\n    return newColumn;\n  }\n\n  public constructor(col: DG.Column) {\n    this._column = col;\n    const units = this._column.tags[DG.TAGS.UNITS];\n    if (units !== null)\n      this._units = units;\n    else\n      throw new Error('Units are not specified in column');\n    this._notation = this.getNotation();\n    this._defaultGapSymbol = (this.isFasta()) ? this._defaultGapSymbolsDict.FASTA :\n      (this.isHelm()) ? this._defaultGapSymbolsDict.HELM :\n        this._defaultGapSymbolsDict.SEPARATOR;\n  }\n}\n"]}
+UnitsHandler.PeptideFastaAlphabet = new Set([
+    'G', 'L', 'Y', 'S', 'E', 'Q', 'D', 'N', 'F', 'A',
+    'K', 'R', 'H', 'C', 'V', 'P', 'W', 'I', 'M', 'T',
+]);
+UnitsHandler.DnaFastaAlphabet = new Set(['A', 'C', 'G', 'T']);
+UnitsHandler.RnaFastaAlphabet = new Set(['A', 'C', 'G', 'U']);
+//# sourceMappingURL=data:application/json;base64,{"version":3,"file":"units-handler.js","sourceRoot":"","sources":["units-handler.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,MAAM,iBAAiB,CAAC;AAItC,OAAO,EAAC,OAAO,EAAc,MAAM,qBAAqB,CAAC;AASzD,iEAAiE;AACjE,MAAM,OAAO,YAAY;IAmKvB,YAAmB,GAAc;QA9JvB,2BAAsB,GAAG;YACjC,IAAI,EAAE,GAAG;YACT,SAAS,EAAE,EAAE;YACb,KAAK,EAAE,GAAG;SACX,CAAC;QA2JA,IAAI,CAAC,OAAO,GAAG,GAAG,CAAC;QACnB,MAAM,KAAK,GAAG,IAAI,CAAC,OAAO,CAAC,IAAI,CAAC,EAAE,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC;QAC/C,IAAI,KAAK,KAAK,IAAI;YAChB,IAAI,CAAC,MAAM,GAAG,KAAK,CAAC;;YAEpB,MAAM,IAAI,KAAK,CAAC,mCAAmC,CAAC,CAAC;QACvD,IAAI,CAAC,SAAS,GAAG,IAAI,CAAC,WAAW,EAAE,CAAC;QACpC,IAAI,CAAC,iBAAiB,GAAG,CAAC,IAAI,CAAC,OAAO,EAAE,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,sBAAsB,CAAC,KAAK,CAAC,CAAC;YAC7E,CAAC,IAAI,CAAC,MAAM,EAAE,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,sBAAsB,CAAC,IAAI,CAAC,CAAC;gBAClD,IAAI,CAAC,sBAAsB,CAAC,SAAS,CAAC;IAC5C,CAAC;IA5JM,MAAM,CAAC,qBAAqB,CAAC,GAAc;QAChD,IAAI,GAAG,CAAC,OAAO,KAAK,EAAE,CAAC,OAAO,CAAC,aAAa;YAC1C,MAAM,IAAI,KAAK,CAAC,oCAAoC,CAAC,CAAC;QAExD,MAAM,KAAK,GAAgB,OAAO,CAAC,QAAQ,CAAC,GAAG,EAAE,CAAC,EAAE,OAAO,CAAC,eAAe,CAAC,CAAC;QAC7E,MAAM,OAAO,GAAG,KAAK,CAAC,UAAU,CAAC,CAAC,CAAC,SAAS,CAAC,CAAC,CAAC,KAAK,CAAC;QAErD,MAAM,kBAAkB,GAA4B;YAClD,CAAC,IAAI,EAAE,YAAY,CAAC,oBAAoB,CAAC;YACzC,CAAC,KAAK,EAAE,YAAY,CAAC,gBAAgB,CAAC;YACtC,CAAC,KAAK,EAAE,YAAY,CAAC,gBAAgB,CAAC;SACvC,CAAC;QAEF,gDAAgD;QAChD,MAAM,qBAAqB,GAAa,kBAAkB,CAAC,GAAG,CAC5D,CAAC,CAAC,EAAE,EAAE,CAAC,OAAO,CAAC,qBAAqB,CAAC,KAAK,CAAC,IAAI,EAAE,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC;QAC1D,MAAM,MAAM,GAAG,IAAI,CAAC,GAAG,CAAC,GAAG,qBAAqB,CAAC,CAAC;QAClD,MAAM,QAAQ,GAAG,MAAM,GAAG,IAAI,CAAC,CAAC,CAAC,kBAAkB,CAAC,qBAAqB,CAAC,OAAO,CAAC,MAAM,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC;QACrG,MAAM,KAAK,GAAW,SAAS,OAAO,IAAI,QAAQ,EAAE,CAAC;QACrD,GAAG,CAAC,MAAM,CAAC,EAAE,CAAC,IAAI,CAAC,KAAK,EAAE,KAAK,CAAC,CAAC;IACnC,CAAC;IAED,IAAc,KAAK,KAAa,OAAO,IAAI,CAAC,MAAM,CAAC,CAAC,CAAC;IAErD,IAAc,MAAM,KAAgB,OAAO,IAAI,CAAC,OAAO,CAAC,CAAC,CAAC;IAE1D,IAAW,QAAQ,KAAe,OAAO,IAAI,CAAC,SAAS,CAAC,CAAC,CAAC;IAE1D,IAAW,gBAAgB,KAAa,OAAO,IAAI,CAAC,iBAAiB,CAAC,CAAC,CAAC;IAExE,IAAW,SAAS;QAClB,MAAM,SAAS,GAAG,IAAI,CAAC,MAAM,CAAC,MAAM,CAAC,WAAW,CAAC,CAAC;QAClD,IAAI,SAAS,KAAK,IAAI;YACpB,OAAO,SAAS,CAAC;;YAEjB,MAAM,IAAI,KAAK,CAAC,mBAAmB,CAAC,CAAC;IACzC,CAAC;IAEM,OAAO,KAAc,OAAO,IAAI,CAAC,QAAQ,iCAAmB,CAAC,CAAC,CAAC;IAE/D,WAAW,KAAc,OAAO,IAAI,CAAC,QAAQ,yCAAuB,CAAC,CAAC,CAAC;IAEvE,MAAM,KAAc,OAAO,IAAI,CAAC,QAAQ,+BAAkB,CAAC,CAAC,CAAC;IAE7D,KAAK,KAAc,OAAO,IAAI,CAAC,KAAK,CAAC,WAAW,EAAE,CAAC,QAAQ,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC;IAErE,KAAK,KAAc,OAAO,IAAI,CAAC,KAAK,CAAC,WAAW,EAAE,CAAC,QAAQ,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC;IAErE,SAAS,KAAc,OAAO,IAAI,CAAC,KAAK,CAAC,WAAW,EAAE,CAAC,QAAQ,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;IAE/E,4DAA4D;IAC5D;;OAEG;IACO,WAAW;QACnB,IAAI,IAAI,CAAC,KAAK,CAAC,WAAW,EAAE,CAAC,UAAU,CAAC,OAAO,CAAC;YAC9C,oCAAsB;aACnB,IAAI,IAAI,CAAC,KAAK,CAAC,WAAW,EAAE,CAAC,UAAU,CAAC,WAAW,CAAC;YACvD,4CAA0B;aACvB,IAAI,IAAI,CAAC,KAAK,CAAC,WAAW,EAAE,CAAC,UAAU,CAAC,MAAM,CAAC;YAClD,kCAAqB;;YAErB,MAAM,IAAI,KAAK,CAAC,6DAA6D,CAAC,CAAC;IACnF,CAAC;IAED;;;;;;OAMG;IACO,YAAY,CAAC,cAAwB;QAC7C,MAAM,GAAG,GAAG,IAAI,CAAC,MAAM,CAAC;QACxB,MAAM,GAAG,GAAG,GAAG,CAAC,MAAM,CAAC;QACvB,MAAM,IAAI,GAAG,cAAc,CAAC,WAAW,EAAE,GAAG,GAAG,GAAG,GAAG,CAAC,IAAI,GAAG,GAAG,CAAC;QACjE,MAAM,UAAU,GAAG,GAAG,CAAC,SAAS,CAAC,OAAO,CAAC,aAAa,CAAC,IAAI,CAAC,CAAC;QAC7D,MAAM,SAAS,GAAG,EAAE,CAAC,MAAM,CAAC,QAAQ,CAAC,QAAQ,EAAE,UAAU,EAAE,IAAI,KAAK,CAAC,GAAG,CAAC,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC,CAAC;QACpF,SAAS,CAAC,OAAO,GAAG,EAAE,CAAC,OAAO,CAAC,aAAa,CAAC;QAC7C,SAAS,CAAC,MAAM,CACd,EAAE,CAAC,IAAI,CAAC,KAAK,EACb,IAAI,CAAC,KAAK,CAAC,OAAO,CAChB,IAAI,CAAC,QAAQ,CAAC,WAAW,EAAE,CAAC,QAAQ,EAAE,EACtC,cAAc,CAAC,WAAW,EAAE,CAAC,QAAQ,EAAE,CACxC,CACF,CAAC;QACF,SAAS,CAAC,MAAM,CAAC,EAAE,CAAC,IAAI,CAAC,aAAa,EAAE,eAAe,CAAC,CAAC;QAEzD,OAAO,SAAS,CAAC;IACnB,CAAC;IAED;;;;;;OAMG;IACI,MAAM,CAAC,YAAY,CAAC,WAAsB;QAC/C,MAAM,GAAG,GAAiB,IAAI,YAAY,CAAC,WAAW,CAAC,CAAC;QACxD,MAAM,cAAc,GAAG,GAAG,CAAC,QAAQ,CAAC;QACpC,OAAO,GAAG,CAAC,YAAY,CAAC,cAAc,CAAC,CAAC;IAC1C,CAAC;IAED;;;;;OAKG;IACI,MAAM,CAAC,kBAAkB,CAAC,KAAa;QAC5C,KAAK,GAAG,KAAK,CAAC,WAAW,EAAE,CAAC;QAC5B,MAAM,QAAQ,GAAG,gGAAmD,CAAC;QACrE,MAAM,SAAS,GAAG,CAAC,KAAK,EAAE,KAAK,EAAE,IAAI,CAAC,CAAC;QAEvC,MAAM,eAAe,GAAG,QAAQ,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,KAAK,CAAC,UAAU,CAAC,CAAC,CAAC,WAAW,EAAE,CAAC,CAAC,CAAC;QAChF,MAAM,gBAAgB,GAAG,SAAS,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,KAAK,CAAC,QAAQ,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,qBAAqB;QACxF,OAAO,eAAe,IAAI,gBAAgB,CAAC;IAC7C,CAAC;IAED;;;;;;;;OAQG;IACI,MAAM,CAAC,sBAAsB,CAClC,GAAW,EACX,IAAY,EACZ,KAAa;QAEb,4EAA4E;QAC5E,2BAA2B;QAC3B,+CAA+C;QAC/C,IAAI,CAAC,YAAY,CAAC,kBAAkB,CAAC,KAAK,CAAC;YACzC,MAAM,IAAI,KAAK,CAAC,uCAAuC,CAAC,CAAC;QAC3D,MAAM,SAAS,GAAG,EAAE,CAAC,MAAM,CAAC,QAAQ,CAAC,QAAQ,EAAE,IAAI,EAAE,IAAI,KAAK,CAAC,GAAG,CAAC,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC,CAAC;QAC9E,SAAS,CAAC,OAAO,GAAG,EAAE,CAAC,OAAO,CAAC,aAAa,CAAC;QAC7C,SAAS,CAAC,MAAM,CAAC,EAAE,CAAC,IAAI,CAAC,KAAK,EAAE,KAAK,CAAC,CAAC;QACvC,OAAO,SAAS,CAAC;IACnB,CAAC;;AAtJsB,iCAAoB,GAAG,IAAI,GAAG,CAAC;IACpD,GAAG,EAAE,GAAG,EAAE,GAAG,EAAE,GAAG,EAAE,GAAG,EAAE,GAAG,EAAE,GAAG,EAAE,GAAG,EAAE,GAAG,EAAE,GAAG;IAChD,GAAG,EAAE,GAAG,EAAE,GAAG,EAAE,GAAG,EAAE,GAAG,EAAE,GAAG,EAAE,GAAG,EAAE,GAAG,EAAE,GAAG,EAAE,GAAG;CACjD,CAAC,CAAC;AACoB,6BAAgB,GAAG,IAAI,GAAG,CAAC,CAAC,GAAG,EAAE,GAAG,EAAE,GAAG,EAAE,GAAG,CAAC,CAAC,CAAC;AACjD,6BAAgB,GAAG,IAAI,GAAG,CAAC,CAAC,GAAG,EAAE,GAAG,EAAE,GAAG,EAAE,GAAG,CAAC,CAAC,CAAC","sourcesContent":["import * as DG from 'datagrok-api/dg';\nimport * as ui from 'datagrok-api/ui';\nimport * as grok from 'datagrok-api/grok';\n\nimport {WebLogo, SeqColStats} from '../viewers/web-logo';\n\n/** enum type to simplify setting \"user-friendly\" notation if necessary */\nexport const enum NOTATION {\n  FASTA = 'FASTA',\n  SEPARATOR = 'SEPARATOR',\n  HELM = 'HELM'\n}\n\n/** Class for handling notation units in Macromolecule columns */\nexport class UnitsHandler {\n  protected readonly _column: DG.Column; // the column to be converted\n  protected _units: string; // units, of the form fasta:SEQ:NT, etc.\n  protected _notation: NOTATION; // current notation (without :SEQ:NT, etc.)\n  protected _defaultGapSymbol: string;\n  protected _defaultGapSymbolsDict = {\n    HELM: '*',\n    SEPARATOR: '',\n    FASTA: '-',\n  };\n\n  public static readonly PeptideFastaAlphabet = new Set([\n    'G', 'L', 'Y', 'S', 'E', 'Q', 'D', 'N', 'F', 'A',\n    'K', 'R', 'H', 'C', 'V', 'P', 'W', 'I', 'M', 'T',\n  ]);\n  public static readonly DnaFastaAlphabet = new Set(['A', 'C', 'G', 'T']);\n  public static readonly RnaFastaAlphabet = new Set(['A', 'C', 'G', 'U']);\n\n  public static setUnitsToFastaColumn(col: DG.Column) {\n    if (col.semType !== DG.SEMTYPE.MACROMOLECULE)\n      throw new Error('Fasta column must be MACROMOLECULE');\n\n    const stats: SeqColStats = WebLogo.getStats(col, 5, WebLogo.splitterAsFasta);\n    const seqType = stats.sameLength ? 'SEQ.MSA' : 'SEQ';\n\n    const alphabetCandidates: [string, Set<string>][] = [\n      ['PT', UnitsHandler.PeptideFastaAlphabet],\n      ['DNA', UnitsHandler.DnaFastaAlphabet],\n      ['RNA', UnitsHandler.RnaFastaAlphabet],\n    ];\n\n    // Calculate likelihoods for alphabet_candidates\n    const alphabetCandidatesSim: number[] = alphabetCandidates.map(\n      (c) => WebLogo.getAlphabetSimilarity(stats.freq, c[1]));\n    const maxCos = Math.max(...alphabetCandidatesSim);\n    const alphabet = maxCos > 0.65 ? alphabetCandidates[alphabetCandidatesSim.indexOf(maxCos)][0] : 'UN';\n    const units: string = `fasta:${seqType}:${alphabet}`;\n    col.setTag(DG.TAGS.UNITS, units);\n  }\n\n  protected get units(): string { return this._units; }\n\n  protected get column(): DG.Column { return this._column; }\n\n  public get notation(): NOTATION { return this._notation; }\n\n  public get defaultGapSymbol(): string { return this._defaultGapSymbol; }\n\n  public get separator(): string {\n    const separator = this.column.getTag('separator');\n    if (separator !== null)\n      return separator;\n    else\n      throw new Error('Separator not set');\n  }\n\n  public isFasta(): boolean { return this.notation === NOTATION.FASTA; }\n\n  public isSeparator(): boolean { return this.notation === NOTATION.SEPARATOR; }\n\n  public isHelm(): boolean { return this.notation === NOTATION.HELM; }\n\n  public isRna(): boolean { return this.units.toLowerCase().endsWith('rna'); }\n\n  public isDna(): boolean { return this.units.toLowerCase().endsWith('dna'); }\n\n  public isPeptide(): boolean { return this.units.toLowerCase().endsWith('pt'); }\n\n  /** Associate notation types with the corresponding units */\n  /**\n   * @return {NOTATION}     Notation associated with the units type\n   */\n  protected getNotation(): NOTATION {\n    if (this.units.toLowerCase().startsWith('fasta'))\n      return NOTATION.FASTA;\n    else if (this.units.toLowerCase().startsWith('separator'))\n      return NOTATION.SEPARATOR;\n    else if (this.units.toLowerCase().startsWith('helm'))\n      return NOTATION.HELM;\n    else\n      throw new Error('The column has units that do not correspond to any notation');\n  }\n\n  /**\n   * Create a new empty column of the specified notation type and the same\n   * length as column\n   *\n   * @param {NOTATION} targetNotation\n   * @return {DG.Column}\n   */\n  protected getNewColumn(targetNotation: NOTATION): DG.Column {\n    const col = this.column;\n    const len = col.length;\n    const name = targetNotation.toLowerCase() + '(' + col.name + ')';\n    const newColName = col.dataFrame.columns.getUnusedName(name);\n    const newColumn = DG.Column.fromList('string', newColName, new Array(len).fill(''));\n    newColumn.semType = DG.SEMTYPE.MACROMOLECULE;\n    newColumn.setTag(\n      DG.TAGS.UNITS,\n      this.units.replace(\n        this.notation.toLowerCase().toString(),\n        targetNotation.toLowerCase().toString()\n      )\n    );\n    newColumn.setTag(DG.TAGS.CELL_RENDERER, 'Macromolecule');\n\n    return newColumn;\n  }\n\n  /**\n   * Create a new empty column using templateCol as a template\n   *\n   * @param {DG.Column} templateCol  the properties and units of this column are used as a\n   * template to build the new one\n   * @return {DG.Column}\n   */\n  public static getNewColumn(templateCol: DG.Column): DG.Column {\n    const col: UnitsHandler = new UnitsHandler(templateCol);\n    const targetNotation = col.notation;\n    return col.getNewColumn(targetNotation);\n  }\n\n  /**\n   * A helper function checking the validity of the 'units' string\n   *\n   * @param {string} units  the string to be validated\n   * @return {boolean}\n   */\n  public static unitsStringIsValid(units: string): boolean {\n    units = units.toLowerCase();\n    const prefixes = [NOTATION.FASTA, NOTATION.SEPARATOR, NOTATION.HELM];\n    const postfixes = ['rna', 'dna', 'pt'];\n\n    const prefixCriterion = prefixes.some((p) => units.startsWith(p.toLowerCase()));\n    const postfixCriterion = postfixes.some((p) => units.endsWith(p)); // already lowercase;\n    return prefixCriterion && postfixCriterion;\n  }\n\n  /**\n   * Construct a new column of semantic type MACROMOLECULE from the list of\n   * specified parameters\n   *\n   * @param {number}    len  the length of the new column\n   * @param {string}    name  the name of the new column\n   * @param {string}    units  the units of the new column\n   * @return {DG.Column}\n   */\n  public static getNewColumnFromParams(\n    len: number,\n    name: string,\n    units: string\n  ): DG.Column {\n    // WARNING: in this implementation is is impossible to verify the uniqueness\n    // of the new column's name\n    // TODO: verify the validity of units parameter\n    if (!UnitsHandler.unitsStringIsValid(units))\n      throw new Error('Invalid format of \\'units\\' parameter');\n    const newColumn = DG.Column.fromList('string', name, new Array(len).fill(''));\n    newColumn.semType = DG.SEMTYPE.MACROMOLECULE;\n    newColumn.setTag(DG.TAGS.UNITS, units);\n    return newColumn;\n  }\n\n  public constructor(col: DG.Column) {\n    this._column = col;\n    const units = this._column.tags[DG.TAGS.UNITS];\n    if (units !== null)\n      this._units = units;\n    else\n      throw new Error('Units are not specified in column');\n    this._notation = this.getNotation();\n    this._defaultGapSymbol = (this.isFasta()) ? this._defaultGapSymbolsDict.FASTA :\n      (this.isHelm()) ? this._defaultGapSymbolsDict.HELM :\n        this._defaultGapSymbolsDict.SEPARATOR;\n  }\n}\n"]}

No alert changes

Improved metrics

Total package byte prevSize

308497

increased by5.6%

Number of package files

45

increased by7.14%

Lines of code

2303

increased by5.64%

No dependency changes