@oncojs/lolliplot - npm Package Compare versions

Comparing version 0.5.12 to 0.7.0

dist/es6/index.js

@@ -53,2 +53,6 @@ import invariant from 'invariant';
       animate = _ref$animate === undefined ? true : _ref$animate,
+      _ref$hasCustomMutatio = _ref.hasCustomMutationColor,
+      hasCustomMutationColor = _ref$hasCustomMutatio === undefined ? false : _ref$hasCustomMutatio,
+      _ref$getMutationColor = _ref.getMutationColor,
+      getMutationColor = _ref$getMutationColor === undefined ? function () {} : _ref$getMutationColor,
       _ref$onMutationClick = _ref.onMutationClick,
@@ -85,8 +89,8 @@ onMutationClick = _ref$onMutationClick === undefined ? function () {} : _ref$onMutationClick,
 
-  var consequences = groupByType('consequence', data.mutations);
-  var impacts = groupByType('impact', data.mutations);
+  var consequences = hasCustomMutationColor ? {} : groupByType('consequence', data.mutations);
+  var impacts = hasCustomMutationColor ? {} : groupByType('impact', data.mutations);
 
   var colorScale = d3.schemeCategory20 ? d3.scaleOrdinal(d3.schemeCategory20).domain(d3.range(20)) : d3.scale.category20().domain(d3.range(20));
 
-  var consequenceColors = Object.keys(consequences).reduce(function (acc, type, i) {
+  var consequenceColors = hasCustomMutationColor ? {} : Object.keys(consequences).reduce(function (acc, type, i) {
     var _Object$assign;
@@ -216,2 +220,4 @@
     scaleLinearY: scaleLinearY,
+    hasCustomMutationColor: hasCustomMutationColor,
+    getMutationColor: getMutationColor,
     onMutationClick: onMutationClick,
@@ -288,3 +294,3 @@ onMutationMouseover: onMutationMouseover,
 
-  var _setupStats = setupStats({
+  var _ref2 = hideStats ? {} : setupStats({
     d3: d3,
@@ -311,6 +317,6 @@ d3Root: d3Root,
   }),
-      stats = _setupStats.stats,
-      consequencesCheckboxContainers = _setupStats.consequencesCheckboxContainers,
-      impactsCheckboxContainers = _setupStats.impactsCheckboxContainers,
-      mutationCount = _setupStats.mutationCount;
+      stats = _ref2.stats,
+      consequencesCheckboxContainers = _ref2.consequencesCheckboxContainers,
+      impactsCheckboxContainers = _ref2.impactsCheckboxContainers,
+      mutationCount = _ref2.mutationCount;
 
@@ -422,3 +428,3 @@ var draw = animator({
     svg.remove();
-    stats.remove();
+    if (!hideStats) stats.remove();
   };
@@ -425,0 +431,0 @@

dist/es6/mutations.js

@@ -8,2 +8,4 @@ import { halfPixel } from './spatial';
       scaleLinearY = _ref.scaleLinearY,
+      hasCustomMutationColor = _ref.hasCustomMutationColor,
+      getMutationColor = _ref.getMutationColor,
       onMutationClick = _ref.onMutationClick,
@@ -54,3 +56,3 @@ onMutationMouseover = _ref.onMutationMouseover,
     fill: function fill(d) {
-      return consequenceColors[d.consequence];
+      return hasCustomMutationColor ? getMutationColor(d) : consequenceColors[d.consequence];
     }
@@ -57,0 +59,0 @@ }).on('mouseover', function (d) {

dist/lib/index.js

@@ -98,2 +98,6 @@ 'use strict';
       animate = _ref$animate === undefined ? true : _ref$animate,
+      _ref$hasCustomMutatio = _ref.hasCustomMutationColor,
+      hasCustomMutationColor = _ref$hasCustomMutatio === undefined ? false : _ref$hasCustomMutatio,
+      _ref$getMutationColor = _ref.getMutationColor,
+      getMutationColor = _ref$getMutationColor === undefined ? function () {} : _ref$getMutationColor,
       _ref$onMutationClick = _ref.onMutationClick,
@@ -130,8 +134,8 @@ onMutationClick = _ref$onMutationClick === undefined ? function () {} : _ref$onMutationClick,
 
-  var consequences = (0, _groupByType2.default)('consequence', data.mutations);
-  var impacts = (0, _groupByType2.default)('impact', data.mutations);
+  var consequences = hasCustomMutationColor ? {} : (0, _groupByType2.default)('consequence', data.mutations);
+  var impacts = hasCustomMutationColor ? {} : (0, _groupByType2.default)('impact', data.mutations);
 
   var colorScale = d3.schemeCategory20 ? d3.scaleOrdinal(d3.schemeCategory20).domain(d3.range(20)) : d3.scale.category20().domain(d3.range(20));
 
-  var consequenceColors = Object.keys(consequences).reduce(function (acc, type, i) {
+  var consequenceColors = hasCustomMutationColor ? {} : Object.keys(consequences).reduce(function (acc, type, i) {
     var _Object$assign;
@@ -261,2 +265,4 @@
     scaleLinearY: scaleLinearY,
+    hasCustomMutationColor: hasCustomMutationColor,
+    getMutationColor: getMutationColor,
     onMutationClick: onMutationClick,
@@ -333,3 +339,3 @@ onMutationMouseover: onMutationMouseover,
 
-  var _setupStats = (0, _stats.setupStats)({
+  var _ref2 = hideStats ? {} : (0, _stats.setupStats)({
     d3: d3,
@@ -356,6 +362,6 @@ d3Root: d3Root,
   }),
-      stats = _setupStats.stats,
-      consequencesCheckboxContainers = _setupStats.consequencesCheckboxContainers,
-      impactsCheckboxContainers = _setupStats.impactsCheckboxContainers,
-      mutationCount = _setupStats.mutationCount;
+      stats = _ref2.stats,
+      consequencesCheckboxContainers = _ref2.consequencesCheckboxContainers,
+      impactsCheckboxContainers = _ref2.impactsCheckboxContainers,
+      mutationCount = _ref2.mutationCount;
 
@@ -467,3 +473,3 @@ var draw = (0, _animator2.default)({
     svg.remove();
-    stats.remove();
+    if (!hideStats) stats.remove();
   };
@@ -470,0 +476,0 @@

dist/lib/mutations.js

@@ -18,2 +18,4 @@ 'use strict';
       scaleLinearY = _ref.scaleLinearY,
+      hasCustomMutationColor = _ref.hasCustomMutationColor,
+      getMutationColor = _ref.getMutationColor,
       onMutationClick = _ref.onMutationClick,
@@ -64,3 +66,3 @@ onMutationMouseover = _ref.onMutationMouseover,
     fill: function fill(d) {
-      return consequenceColors[d.consequence];
+      return hasCustomMutationColor ? getMutationColor(d) : consequenceColors[d.consequence];
     }
@@ -67,0 +69,0 @@ }).on('mouseover', function (d) {

index.js

@@ -41,2 +41,4 @@ // @flow
   animate?: bool,
+  hasCustomMutationColor?: bool,
+  getMutationColor?: Function,
   onMutationClick?: Function,
@@ -77,2 +79,4 @@ onMutationMouseover?: Function,
   animate = true,
+  hasCustomMutationColor = false,
+  getMutationColor = () => {},
   onMutationClick = () => {},
@@ -104,4 +108,4 @@ onMutationMouseover = () => {},
 
-  let consequences = groupByType(`consequence`, data.mutations)
-  let impacts = groupByType(`impact`, data.mutations)
+  let consequences = hasCustomMutationColor ? {} : groupByType(`consequence`, data.mutations)
+  let impacts = hasCustomMutationColor ? {} : groupByType(`impact`, data.mutations)
 
@@ -112,3 +116,3 @@ let colorScale = d3.schemeCategory20
 
-  let consequenceColors = Object.keys(consequences).reduce((acc, type, i) => ({
+  let consequenceColors = hasCustomMutationColor ? {} : Object.keys(consequences).reduce((acc, type, i) => ({
     ...acc,
@@ -264,2 +268,4 @@ [type]: colorScale(i * 3),
     scaleLinearY,
+    hasCustomMutationColor,
+    getMutationColor,
     onMutationClick,
@@ -342,3 +348,3 @@ onMutationMouseover,
     mutationCount,
-  } = setupStats({
+  } = hideStats ? {} : setupStats({
     d3,
@@ -473,3 +479,3 @@ d3Root,
     svg.remove()
-    stats.remove()
+    if (!hideStats) stats.remove()
   }
@@ -476,0 +482,0 @@

mutations.js

@@ -10,2 +10,4 @@ // @flow
   scaleLinearY: Function,
+  hasCustomMutationColor: bool,
+  getMutationColor: Function,
   onMutationClick: Function,
@@ -31,2 +33,4 @@ onMutationMouseover: ?Function,
   scaleLinearY,
+  hasCustomMutationColor,
+  getMutationColor,
   onMutationClick,
@@ -74,3 +78,3 @@ onMutationMouseover,
       r: theme.mutationRadius,
-      fill: d => consequenceColors[d.consequence],
+      fill: d => hasCustomMutationColor ? getMutationColor(d) : consequenceColors[d.consequence],
     })
@@ -77,0 +81,0 @@ .on(`mouseover`, d => {

package.json

@@ -29,3 +29,3 @@ {
   "name": "@oncojs/lolliplot",
-  "version": "0.5.12",
+  "version": "0.7.0",
   "description": "A protein viewer built with d3",
@@ -32,0 +32,0 @@ "browser": "dist/umd/index.min.js",

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Worsened metrics

Total package byte prevSize

1838650

decreased by-0.01%

Number of package files

53

decreased by-5.36%

Lines of code

16802

decreased by-0.46%

No dependency changes