Security News
JavaScript Leaders Demand Oracle Release the JavaScript Trademark
In an open letter, JavaScript community leaders urge Oracle to give up the JavaScript trademark, arguing that it has been effectively abandoned through nonuse.
biomedical-id-resolver-sri
Advanced tools
js library for converting biological ids in batch using SRI node normalizer
js library for converting biological ids in batch using the SRI node normalizer.
$ npm i biomedical-id-resolver-sri
const resolve = require('biomedical-id-resolver-sri');
// input can be an object, with semantic type as the key, and array of CURIEs as value
let input = {
"Gene": ["NCBIGene:1017", "NCBIGene:1018", "HGNC:1177"],
"SmallMolecule": ["CHEBI:15377"],
"Disease": ["MONDO:0004976"],
"Cell": ["CL:0002372"]
};
//input can also be an array of curies
input = ["NCBIGene:1017", "MONDO:0004976"];
(async () => {
let res = await resolve(input);
console.log(res);
})();
{
"NCBIGene:1017": [
{
"id": {
"identifier": "NCBIGene:1017",
"label": "CDK2"
},
"equivalent_identifiers": [
{
"identifier": "NCBIGene:1017",
"label": "CDK2"
},
{
"identifier": "ENSEMBL:ENSG00000123374"
},
{
"identifier": "HGNC:1771",
"label": "CDK2"
},
{
"identifier": "OMIM:116953"
},
{
"identifier": "UMLS:C1332733",
"label": "CDK2 gene"
}
],
"type": [
"biolink:Gene",
"biolink:GeneOrGeneProduct",
"biolink:BiologicalEntity",
"biolink:NamedThing",
"biolink:Entity",
"biolink:MacromolecularMachineMixin"
],
"primaryID": "NCBIGene:1017",
"label": "CDK2",
"attributes": {},
"semanticType": "Gene",
"semanticTypes": [
"biolink:Gene",
"biolink:GeneOrGeneProduct",
"biolink:BiologicalEntity",
"biolink:NamedThing",
"biolink:Entity",
"biolink:MacromolecularMachineMixin"
],
"dbIDs": {
"NCBIGene": [
"1017"
],
"ENSEMBL": [
"ENSG00000123374"
],
"HGNC": [
"1771"
],
"OMIM": [
"116953"
],
"UMLS": [
"C1332733"
],
"name": [
"CDK2",
"CDK2 gene"
]
},
"curies": [
"NCBIGene:1017",
"ENSEMBL:ENSG00000123374",
"HGNC:1771",
"OMIM:116953",
"UMLS:C1332733"
]
}
]
}
FAQs
js library for converting biological ids in batch using SRI node normalizer
The npm package biomedical-id-resolver-sri receives a total of 0 weekly downloads. As such, biomedical-id-resolver-sri popularity was classified as not popular.
We found that biomedical-id-resolver-sri demonstrated a not healthy version release cadence and project activity because the last version was released a year ago. It has 1 open source maintainer collaborating on the project.
Did you know?
Socket for GitHub automatically highlights issues in each pull request and monitors the health of all your open source dependencies. Discover the contents of your packages and block harmful activity before you install or update your dependencies.
Security News
In an open letter, JavaScript community leaders urge Oracle to give up the JavaScript trademark, arguing that it has been effectively abandoned through nonuse.
Security News
The initial version of the Socket Python SDK is now on PyPI, enabling developers to more easily interact with the Socket REST API in Python projects.
Security News
Floating dependency ranges in npm can introduce instability and security risks into your project by allowing unverified or incompatible versions to be installed automatically, leading to unpredictable behavior and potential conflicts.