bionode-ncbi - npm Package Compare versions

Comparing version 0.0.2 to 0.0.3

lib/bionode-ncbi.js

@@ -34,2 +34,3 @@ // # bionode-ncbi
 var tool = require('tool-stream')
+var debug = require('debug')('bionode-ncbi')
 
@@ -42,3 +43,3 @@
   this.DEFAULTS = 'retmode=json&version=2.0'
-  this.RETURNMAX = 1000
+  this.RETURNMAX = 500
   this.XMLPROPERTIES = {
@@ -98,7 +99,18 @@ 'sra': ['expxml', 'runs'],
     ].join('&')
+    
     var getUIDs = _requestData(db)
-    request({ uri: query, json: true })
+    
+    debug('esearch request', query)
+    
+    var req = request({ uri: query, json: true })
+    
+    req.on('response', function(resp) {
+      debug('esearch response', resp.statusCode)
+    })
+    
+    req
     .pipe(JSONStream.parse())
     .pipe(_requestsSplit(db))
     .pipe(getUIDs)
+    
     _attachStandardEvents(getUIDs, self, next)
@@ -111,2 +123,3 @@ }
   function transform(obj, enc, next) {
+    debug('esearch results', obj)
     var self = this
@@ -151,4 +164,12 @@ var webenv = obj.esearchresult.webenv
     }
-
-    request({uri: query, json: true})
+    
+    debug('esummary request', query)
+    
+    var req = request({uri: query, json: true})
+    
+    req.on('response', function(resp) {
+      debug('esummary response', resp.statusCode)
+    })
+    
+    req
     .pipe(JSONStream.parse())
@@ -205,3 +226,5 @@ .pipe(tool.extractProperty('result'))
     var getLink = tool.attachToObject(link, 'destUID')
-
+    
+    debug('elink request', query)
+    
     request({ uri: query, json: true })
@@ -324,2 +347,3 @@ .pipe(_wait(500))
     if (!fs.existsSync(path)) {
+      debug('downloading', obj.url)
       dld(obj.url, folder, chunkSize)
@@ -326,0 +350,0 @@ .on('data', log)

package.json

 {
   "name": "bionode-ncbi",
   "description": "Node.js module for working with the NCBI API (aka e-utils) using Streams.",
-  "version": "0.0.2",
+  "version": "0.0.3",
   "homepage": "http://github.com/bionode/bionode-ncbi",
@@ -27,8 +27,9 @@ "repository": {
   "devDependencies": {
+    "coveralls": "~2.6.1",
+    "debug": "^1.0.2",
+    "docco": "~0.6.2",
+    "istanbul": "~0.2.4",
     "mocha": "~1.17.0",
     "mocha-lcov-reporter": "0.0.1",
-    "should": "~3.0.1",
-    "istanbul": "~0.2.4",
-    "coveralls": "~2.6.1",
-    "docco": "~0.6.2"
+    "should": "~3.0.1"
   },
@@ -35,0 +36,0 @@ "keywords": [

No alert changes

Improved metrics

Total package byte prevSize

434237

increased by0.12%

Lines of code

1336

increased by1.06%

Worsened metrics

Dev dependency count

7

increased by16.67%

No dependency changes