fileformats-medimage-extras
Advanced tools
Classes for representing different file formats in Python classes for use in type hinting in data workflows
.. image:: https://github.com/ArcanaFramework/fileformats-medimage/actions/workflows/ci-cd.yml/badge.svg :target: https://github.com/ArcanaFramework/fileformats-medimage/actions/workflows/ci-cd.yml .. image:: https://codecov.io/gh/ArcanaFramework/fileformats-medimage/branch/main/graph/badge.svg?token=UIS0OGPST7 :target: https://codecov.io/gh/ArcanaFramework/fileformats-medimage .. image:: https://img.shields.io/pypi/pyversions/fileformats-medimage-extras.svg :target: https://pypi.python.org/pypi/fileformats-medimage-extras/ :alt: Supported Python versions .. image:: https://img.shields.io/badge/docs-latest-brightgreen.svg?style=flat :target: https://arcanaframework.github.io/fileformats/ :alt: Documentation Status
This is a extras module for the
fileformats-medimage <https://github.com/ArcanaFramework/fileformats-medimage>__ package, which provides
additional functionality to format classes (i.e. aside from basic identification and validation), such as
conversion tools, metadata parsers, test data generators, etc...
In order to perform conversions between DICOM and neuroimaging formats such as NIfTI you will need to install the following packages
Dcm2niix <https://github.com/rordenlab/dcm2niix>__MRtrix3 <https://github.com/MRtrix3/MRtrix3>__Please see their installation instructions for the best method for your system
(alternatively the
Test GitHub action <https://github.com/ArcanaFramework/fileformats-medimage-extras/blob/main/.github/workflows/tests.yml>__
contains an example installation for Ubuntu)
This extension can be installed for Python 3 using pip::
$ pip3 install fileformats-medimage-extras
This work is licensed under a
Creative Commons Attribution 4.0 International License <http://creativecommons.org/licenses/by/4.0/>_
.. image:: https://i.creativecommons.org/l/by/4.0/88x31.png :target: http://creativecommons.org/licenses/by/4.0/ :alt: Creative Commons Attribution 4.0 International License
FAQs
Classes for representing different file formats in Python classes for use in type hinting in data workflows
We found that fileformats-medimage-extras demonstrated a healthy version release cadence and project activity because the last version was released less than a year ago. It has 1 open source maintainer collaborating on the project.
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