inte-edc

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inte-edc

Integrating HIV, Diabetes and Hypertension Services in Africa: A Cluster - Randomised Trial in Tanzania and Uganda: INTE Africa Trial

Liverpool School of Tropical Medicine

https://www.isrctn.com/ISRCTN43896688

See also https://github.com/clinicedc/edc

Installation

To setup and run a test server locally

You'll need mysql and Redis. Create the database

.. code-block:: bash

mysql -Bse 'create database inte character set utf8;'

Create and activate a virtual environment

.. code-block:: bash

conda create -n edc python=3.9 conda activate edc

Clone the main repo and checkout master

.. code-block:: bash

mkdir ~/app cd ~/app git clone https://github.com/inte-africa-trial/inte-edc.git cd ~/app/inte-edc git checkout master

Copy the test environment file

.. code-block:: bash

cd ~/app/inte-edc git checkout master cp .env-tests .env

Edit the environment file (.env) to include your mysql password in the DATABASE_URL.

.. code-block:: bash

look for and update this line

DATABASE_URL=mysql://user:password@127.0.0.1:3306/inte

Continue with the installation

.. code-block:: bash

cd ~/app/inte-edc git checkout master pip install -U -r requirements.txt python manage.py migrate python manage.py import_randomization_list python manage.py import_holidays

Ensure Redis is running

.. code-block:: bash

$ redis-cli ping PONG

Create a user and start up runserver

.. code-block:: bash

cd ~/app/inte-edc git checkout master python manage.py createsuperuser python manage.py runserver

Login::

localhost:8000

Once logged in, go to you user account and update your group memberships. As a power user add yourself to the following

• ACCOUNT_MANAGER
• ADMINISTRATION
• AE
• AE_REVIEW
• CLINIC
• DATA_MANAGER
• DATA_QUERY
• EVERYONE
• EXPORT
• LAB
• LAB_VIEW
• PHARMACY
• PII
• RANDO
• REVIEW
• SCREENING
• TMG
• UNBLINDING_REQUESTORS
• UNBLINDING_REVIEWERS

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.. |actions| image:: https://github.com/inte-africa-trial/inte-edc/workflows/build/badge.svg?branch=develop :target: https://github.com/inte-africa-trial/inte-edc/actions?query=workflow:build

.. |codecov| image:: https://codecov.io/gh/inte-africa-trial/inte-edc/branch/develop/graph/badge.svg :target: https://codecov.io/gh/inte-africa-trial/inte-edc

.. |downloads| image:: https://pepy.tech/badge/inte-edc :target: https://pepy.tech/project/inte-edc