Genomic analyses require flexible models that can be adapted to the needs of the user.
Limix is a flexible and efficient linear mixed model library with interfaces to Python. It includes methods for
We have an extensive documentation of the library. If you need further help or want to discuss anything related to limix, please, join our forum 💬 and have a chat with us 😃. In case you have found a bug, please, report it creating an issue.
NOTE: We will be maintaining limix 2.0.x for a while, in case you find some missing feature in limix 3.0.x. If that is the case, please, type
pip install "limix <3,>=2"in your terminal.
Installation is easy and works on macOS, Linux, and Windows:
pip install limix
If you already have Limix but want to upgrade it to the latest version:
pip install limix --upgrade
After installation, you can test it
python -c "import limix; limix.test()"
as long as you have pytest.
This project is licensed under the Apache License License.
FAQs
Genetic analysis toolbox using mixed models
We found that limix demonstrated a healthy version release cadence and project activity because the last version was released less than a year ago. It has 2 open source maintainers collaborating on the project.
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