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MetaClock
MetaClock is an integrated framework for reconstructing time-resolved evolutionary history for microbial genomes using large-scale (meta)genomics data from ancient and contemporary samples.
Main features
- Automated reconstruction of whole-genome alignment from large-scale metagenomics data using multiple reference genomes
- Automated authentication for ancient DNA origin, damaged sites removal, SNV analysis etc.
- Rich utilities for manual curation to enhance the quality of phylogenetic and molecular dating analysis
Installation
Bioconda
You can install MetaClock using conda as follows:
The package will be publically available once the manuscript is submitted
Repository
You can clone the MetaClock repository from GitHub:
The package will be publically available once the manuscript is submitted
Dependencies:
Tutorials
Support
Citation
FAQs
metaclock package test
We found that metaclock demonstrated a healthy version release cadence and project activity because the last version was released less than a year ago. It has 1 open source maintainer collaborating on the project.
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