Crop regions in napari manually
Crop in any dimension
Cut a volume using a plane
Note: this functionality currently only works with 3D data
Create a new shapes layer to annotate the region you would like to crop:
Use the rectangle tool to annotate a region. Start the crop tool from the Tools > Utilities > Crop region menu.
Click the Run button to crop the region.
You can also use the Select shapes tool to move the rectangle to a new place and crop another region by clicking on Run.
Hint: You can also use the napari-tabu plugin to send all your cropped images to a new napari window.
This napari plugin was generated with Cookiecutter using with @napari's cookiecutter-napari-plugin template.
You can install napari-crop via pip:
pip install napari-crop
Contributions are very welcome.
Distributed under the terms of the BSD-3 license, "napari-crop" is free and open source software
If you encounter any problems, please create a thread on image.sc along with a detailed description and tag @haesleinhuepf.
FAQs
Crop regions in napari manually
We found that napari-crop demonstrated a healthy version release cadence and project activity because the last version was released less than a year ago. It has 2 open source maintainers collaborating on the project.
Did you know?
Socket for GitHub automatically highlights issues in each pull request and monitors the health of all your open source dependencies. Discover the contents of your packages and block harmful activity before you install or update your dependencies.
Security News
Create React App is officially deprecated due to React 19 issues and lack of maintenance—developers should switch to Vite or other modern alternatives.
Security News
Oracle seeks to dismiss fraud claims in the JavaScript trademark dispute, delaying the case and avoiding questions about its right to the name.
Security News
The Linux Foundation is warning open source developers that compliance with global sanctions is mandatory, highlighting legal risks and restrictions on contributions.