anatomogram

Expression Atlas Anatomogram

This is an anatomogram for Expression Atlas that we use to illustrate the experiments.

See demo here.

The ontology IDs are sourced from Uberon, EFO and Plant Ontology.

To install: npm install --save anatomogram

You can reuse it as a React component or add a non-React wrapper. For example uses, see the code for the demo component and how we use it in github.com/gxa or get in touch.

Contribute

To update the anatomograms or ontology IDs read our authoring guidelines. Run npm run parseSvgs to parse the updated IDs.

To add new anatomograms put them in the src/svg directory, then edit the config src/json/svgs.json. The format is pretty straightforward.

When you are finished run a local copy of the demo page:

webpack-dev-server -d

Go to localhost:9000/html and see that the tissues show up like you want them to.