fuzzaldrin-plus
Advanced tools
Fuzzy filtering and string similarity scoring - compatible with fuzzaldrin
A fuzzy search / highlight that specialize for programmer text editor. It tries to provide intuitive result by recognizing patterns that people use while searching.
A rewrite of the fuzzaldrin library. API is backward compatible with some extra options. Tuning has been done from report usage of the Atom text editor.
At this point in time, it may either be merged back into fuzzaldrin or lives as a forked library, we'll see.
We plan to address those issues by scoring runs of consecutive characters. In that scheme, an exact match will be a special case where the run is 100% of the query length.
In original fuzzaldrin, candidate length was used as a proxy for match quality. This work reasonably well when subject is a single word, but break when subject contain multiple words, for example, see:
In Core vs. Controller size is a good indicator of quality, but not so much in Controller vs. ExtentionCore. This situation happens because match compactness matters more than haystack size. Match compactness is the principle behind the scoring of the Selecta project.
So far the examples can be handled by an indexOf call. However, there are times where a single query can target multiple parts of a candidate.
For example when candidate contains multiple words
git push vs. Git Plus: Pushemail handler vs. email/handler.pyAnother example is to jump over common strings.
toLowerCasetoLocaleStringtoLocalLowerCaseWe could use a query like tololo to select the third option of these.
The previous algorithm always selects the first available matching character (leftmost alignment). Only after selection, it will try to identify how to score that character. The problem then is that the most interesting instance of a character is not necessarily on the left.
For example on query itc, we should match
Instead leftmost aligement miss the acronym pattern:
For query core against controller_core leftmost alignment miss the consecutive run:
To handle this, we propose to embed the pattern detection (consecutive and more) inside an optimal alignment scheme. Imagine you have an algorithm that allows you to recognize objects in images; it would make little sense to run it exclusively on the top left corner.
Fuzzladrin handles acronym by giving a large bonus on character matches that start words. Currently, a start-of-word bonus matches almost as much as three proper-case character.
For query install should result be in this order ?
In that example, we have 'Select All' boost the score of the first candidate because we score two word-starts while we only score one for 'install'.
For query git push, should we order result in that order ?
What about the fact we match three start-of-words in Plus Stage Hunk? PSH is very close to 'push' (And Plus contains u).
That kind of question arises even more often when we use optimal selection because the algorithm will lock on those extra acronym points.
What we propose in this project is that start-of-words characters should only have a moderate advantage by themselves. Instead, they form strong score by making an acronym pattern with other start-of-words characters.
For example with query push:
Plus: Stage Hunk: we have P + u + SH grouped as 1, 1, 2push: we have a single group of 4.For example with query psh:
Plus: Stage Hunk: we have PSH so a single group of 3push: we have p + sh so grouped as 1, 2This way we can score both substring and acronym match using the structure of the match. We'll refine the definition of consecutive acronym later.
Some people proposed to give a perfect score to exact case-sensitive matches. This proposition can be understood because exact matches and case-sensitivity are two area where fuzzaldrin is not great.
However should 'switch.css' be an exact match for itc?
Even when we have ImportanceTableCtrl available?
Few people will argue against diag preferring diagnostic to Diagnostics.
However should install prefer "Uninstall" over "Install" ? Or should it be the other way around? In this case, we have to consider the relative priority of case-sensitivity and start-of-word.
Exact matches are used with enougth frequency that we should not only ensure they win against approximate matches but also ensure to rank quality properly amongst them.
We want to prefer match toward the start of the string. Except we also want to prefer match in the filename (which happens near the end of the string)
We want to prefer shorter and shallower path. Except we also want to retrieve some deeper files when filename is clearly better.
We want to prefer matches in the filename
Except when the query describes a full path much better than an approximate file name. (Let's consider query model user vs models/user.rb or moderator_column_users.rb)
Patterns can be composed of
Start-of-words (acronym) characters are special in that they can either forms pattern with the rest of the word or with other acronym characters.
Pattern based scoring replaces a situation where acronyms characters have a large bonus by themselves. Now the bonus is still large but conditional to being part of some pattern.
CamelCase and snake_case acronym are treated exactly the same. They will, however, get different score for matching uppercase/lowercase query
A pattern that span 100% of the query length is called an exact match.
Because every candidate is expected to match all of query larger group should win against multiple smaller one.
The rank of a candidate is the length of it's largest pattern.
When all patterns of a first candidate are larger than patterns in a second one, the candidate with the highest rank is said to be dominant.
When some groups are larger, and some are smaller, the highest rank match is said to be semi-dominant.
Match quality is made of proper casing and context score
Context score considers where does the match occurs in the subject.
Score for a proper case query has both gradual and absolute components.
CamelCase acronym using lowercase query cc.Q: Why can't you simply add extra length for some bonus. For example, score a start-of-word match as if it had an extra character.
Q: Why do you add extra length on exact matches?
Q: Why are you using lowercase to detect CamelCase?
Git Push the P of push will be recognised as CamelCase because we consider <space> as lowercase.Mostly there to help order match of the same rank and match quality, unless the difference in tertiary attributes is large. -(Proper definition of large is to be determined using real life example)
In term of the relative importance of effects it should rank start-of-string > string size > directory depth.
Score is 0 if and only if there is no match.
Otherwise, the score is a strictly positive integer.
The maximum range is score(query,query) whatever that number is. A longer query will have a greater maximal score.
Score exist mainly to for relative order with other scores of the same query and to implements scoring rule described above.
Score have a high dynamic range and consider a lot of information. Equality is unlikely. For that reason, multiplicative bonuses should be preferred over additive ones.
More detail on acronym match
An acronym prefix is a group of characters that are consecutive in the query and sequential in the acronym of the subject. That group starts at the first character of the query and end at the first character of the query, not in the acronym. If there's no missed character, then we have an acronym exact match (100% of query is sequential in the acronym)
For example if we match ssrb against Set Syntax Ruby we'll score it like so
012345678901234
"Set Syntax Ruby"
"000 SSR0b0 0000"
Another example is matching gaa against Git Plus: Add All we'll score it like so
01234567890123456
"Git Plus: Add All"
"000000 GAA00 0000"
P of Plus.Then what about something like "git aa" ?
This is a current limitation. We do not support acronym pattern outside of the prefix. Mostly for performance reason. Acronym outside of the acronym prefix will have some bonus, scoring between isolated character and 2 consecutive. There are multiple thing we can improve if one day we implement a proper multiple word query support, and this is one of them.
Legacy fuzzaldrin had some support for optional characters (Mostly space, see SpaceRegEx). Because the scoring does not support errors, the optional character was simply removed from the query.
With this PR, optimal alignment algorithm supports an unlimited number of errors. The strict matching requirement is handled by a separate method isMatch. The optional character implementation is done by building a subset of the query containing only non-optional characters (coreQuery) and passing that to isMatch.
This new way of doing thing means that while some characters are optional, candidates that match those characters have a better score. What this allow is to add characters to the optional list without compromising ranking.
Optional character contains space, but also - and _ because multiple specs require that we should treat them as space. Also \ and : are also optional to support searching a file using the PHP or Ruby name-space. Finally / is optional to mirror \ and support a better workflow in a multi-OS environment.
Finally option allowErrors would make any character optional. Expected effect of that options would be some forgiveness on the spelling at the price of a slower match.
Score for a given path is computed from the score of the fullpath and score of the filename. For low directory depth, the influence of both is about equal. But, for deeper directory, there is less retrieval effect (importance of basename)
The full path is penalized twice for size. Once for its own size, then a second time for the size of the basename. Extra basename penalty is dampened a bit.
The basename is scored as if allowErrors was set to true. (Full-path must still pass isMatch test). This choice is made to support query such as model user against path model/user. Previously, the basename score would be 0 because it would not find model inside basename user. Variable queryHasSlashes partially addressed this issue, but was inconsistent with usage of <space> as folder separator
When query has slashes (path.sep) the last or last few folder from the path are promoted to the basename. (as many folder from the path as folder in the query)
Let's compare A:surgery and B:gsurvey.
To do so we can try to match every letter of A against every letter of B.
This problem can be solved using a score matrix.
At each position [i,j] the best move can be one of the 3 options.
A[i] with B[j] (move diagonal, add 1 to score)A[i] (move left, copy score)B[j] (move down, copy score)We do not know which one of these 3 is the best move until we reach the end, so we record the score of the best move so far. The last cell contains the score of the best alignment. If we want to output that alignment we need to rebuild it backward from the last cell.
s u r g e r y
g [0,0,0,1,1,1,1] : best move is to align `g` of *g*survey with `g` of sur*g*ery, score 1
s [1,1,1,1,1,1,1] : we can align `s`, but doing so invalidate `g`. Both score 1, we cannot decide
u [1,2,2,2,2,2,2] : if we align s, we can also align u, we have a winner
r [1,2,3,3,3,3,3] : we can align `r`
v [1,2,3,3,3,3,3] : nothing we can do with that `v`, score stay the same
e [1,2,3,3,4,4,4] : we can align `e` (we skipped `g` the same way we skipped `v`)
y [1,2,3,3,4,4,5] : align y (we skipped `r` )
Best alignment is
gsur-ve-y
-|||--|-|
-surg-ery
For those familiar with code diff, this is essentially the same problem. Except, in this case, we the do the alignment of characters in a word and a diff performs alignment of lines in a file. Characters present in the second word but not in the first counts as additions; characters present only in the first word are deletions and characters present in both are matches - like unchanged lines in a diff.
To get that alignment, we start from the last character and trace back the best option. The pattern to looks for an alignment is the corner increase (diagonal+1 is greater than left or up.)
4,4 3,3 2,2 1,1 0,0
4,5 3,4 2,3 1,2 0,1
The pattern to look for to move left is:
3,3
4,4
The pattern to look for to move up is:
3,4
3,4
We try to resolve equality the following way:
3,3
3,3
The LCS algorithm allows to detect which character of the query are common to both words while being in proper order. (For example g is common to both word but discarded because out of order.)
LCS is not immediately useful for fuzzaldrin needs. Because fuzzaldrin require ALL characters of the query to be in subject to have a score greater than 0, LCS for all positive candidates would be the length of the query.
However, the dynamic programming table used to solve LCS is very useful to our need. The ability to select the best path and skip that g even if it is present in both query and candidate is the key to improves over left-most alignment. All we need for this to works is a bit more detail in score than 0 or 1.
Matching character does not have to be binary. Case sensitive match can still prefer proper case, same goes with accents. A diff tools can decide a line has been modified, instead of registering an addition and a deletion. A handwriting recognition tool can decide a and o are somewhat more similar to each other than they are to w, and so on.
We use character similarity as a way to build and score patterns. That is, we consider that character are similar from their own quality ( such as case) as well of being part of a similar neighborhood (consecutive letters or acronyms)
There are some rules that limit our scoring ability (for example we cannot go back in time and correct the score based on future choice) but overall that scheme is very flexible.
While the programming table describes computation, we do not need to store the whole matrix when we only output the score. Fundamentally when computing a score, we only need 3other previously computed cell: UP, LEFT and DIAG.
Suppose we process the cell [3,5]
20, 21, 22, 23, 24, 25, 26, 27, 28, 29
30, 31, 32, 33, 34, 35, 36, 37, 38, 39
To build that score we only need values 24(DIAG), 25(UP), 34(LEFT). So instead of a whole matrix we can keep only the two current lines.
Furthermore, anything on the left of 24 on the first line is not needed anymore. Also, anything to the right of 35 on the second line has not yet been computed. So we can build a more compact structure using one composite row + one diagonal.
score_diag = 24
score_row = 30, 31, 32, 33, 34, 25, 26, 27, 28, 29
Once we have computed the value of the cell [3,5], we can insert that value into the structure, taking care of saving next diagonal before overwriting it.
diag = 25
row = 30, 31, 32, 33, 34, 35, 26, 27, 28, 29
To compute value of cell [3,6] we take
Before entering the matching process, the row is initialized with 0. Before scoring each row, the LEFT and DIAG register are reset to 0.
That strategy has the effect of placing a virtual row and column of 0 before the matrix. Moreover, it allows to deal with boundary condition without any special case.
We set up the row vector with the size of the query. Using a full matrix, scoring a query of size 5 against a path of size 100, would require a 500 cells. Instead, we use a 5 item row + some registers. This should ease memory management pressure.
Each character of the query manages its best score. More precisely, each cell row[j] manage the best score so far of matching query[0..j] against candidate[0..i].
We cache the consecutive score in a virtual matrix following the same composite row scheme that we do with score values.
In fuzzaldrin.score The candidate entirely determines the Neighbourhood quality. It is not affected by which character has been chosen. In highlight, (fuzzaldrin.match) we further refine the formula to make the consecutive bonus conditional to not breaking the consecutive chain:
For example query abcdz vs. subject abcdzbcdz. Between abcd and bcdz, abcd wins for being sooner in the string. Now between the two z, the first one is isolated and the second one is part of a rank 4 group. However given that bcd are matched sooner, the second z is an isolated match, so the first z wins.
Let's consider the following autocomplete scenario.
Should we optimize for case sensitive indexOf before trying other things? Our answer to that question is no.
Case sensitive exact match are valuable because they are rare. Even if the user tries to get them, for each one of those we have to reject 995 entry and deal with 4 other kinds of matches.
This is our first principle for optimization: Most of the haystack is not the needle. Because rejection of candidate happens often, we should be very good at doing that.
Failing a test for case-sensitive indexOf tell us exactly nothing for case-insensitive indexOf, or acronyms, or even scattered letters.
That test is too specific. To reject match efficiently, we should aim for the lowest common denominator: scattered case-insensitive match.
This is exactly the purpose of isMatch.
We just have shown how that sentence applies at the candidate level, but it is also at the character level.
Let's consider this line: if (subject_lw[i] == query_lw[j])
This test is for match points (or hits). It refers to the diag+1 in the algorithm description, with the +1 being refined to handle the differents levels of character and neighborhood similarity.
How often is that condition true ?
Let's consider an alphabet that contain 26 lowercase letters, 10 numbers, a few symbols _!?=<>. That is a 40+ symbol alphabet. Under a uniform usage model of those symbols, we have the hit condition occurs about 2.5% of the time (1/40). If we suppose only 10-20 of those characters are popular, the hit rate is about 5-10%.
This means we'll try to minimize the number of operation that happens outside of math points. In that context, increasing the cost of a hit, while decreasing the cost of non-hits looks like a possibly worthwhile proposition.
A canonical example of this is that, instead of testing each character against the list of separators, setting a flag for next character being a start-of-word, we first confirm a match then look behind for separator. This characterization work is sometimes repeated more than once, but so far this scheme benchmarked better than alternatives we have tried to avoid doing extra work.
Having work concentrated at hit points is also a natural fit to our logic, the most expensive part being to determine how to score similarity between characters (including context similarity). However, it also means we'll want to have some control over the number of positive hits we'll compute - that is the purpose of missed hit optimisation.
To the extent the user is searching for a specific resource, this should be uncommon.
It can still happen in some situation such as:
One way to deal with that is not to use the full matching algorithm when we can deal with something simpler. This is what we have done while searching for indexOf instance.
One special note: Acronym still have to be checked even if we have an exact match: for example query su against StatusUrl. As an exact match it is poor: 'StatusUrl' is a middle of word match and have the wrong case. However as an acronym it is great: 'StatusUrl'. That motivated us to create the specialized scoreAcronyms.
What is nice is that while scoreAcronyms was created to speed up exact matches search, it also provided very valuable information for accuracy. It later became a corner stone in the processing of accidental acronym.
The result is that for exact matches and exact acronym matches we bypass the optimal alignment algorithm, giving very fast results. We still have to deal with fuzzier stacks of needles and the next two optimization address this.
A hit occurs when character of query is also in the subject.
A missed hit occurs when a hit does not improve the score.
To guarantee optimal alignment, every hit has to be considered. However when candidate are long (deep path) & query contains common use character, for example, vowels , we can spend a huge amount of time scoring accidental hits.
So we use the number of missed hit as a heuristic for current score that are unlikely to improve. Let's score itc vs ImportanceTableControl
I of Importance: First occurrence, improve over none.
t of Importance: First occurrence, improve over none.
c of Importance: First occurrence, improve over none.
T of Table : Acronym match, improve over an isolated middle of word.
C of Control : Acronym match, improve over an isolated middle of word.
t of Control: no improvement over acronym T: first hit miss.
After a certain threshold of missed hit we can consider it is unlikely the score will improve by much.
Despite above example hit miss optimization do not affect scoring of exact match (sub-string or acronym)
There are some legitimate use for hit miss, for example while scoring query Mississippi each positive match for s or i may trigger up to 3 hit miss on the other occurrence of that letter in query.
For that reason, we propose counting consecutive hit miss and having a maximum of one hit miss per character of the subject.
Q: Does this grantee improvement over leftmost alignment?
A: It'll often be the case but no guarantee on pathological matches.
For example, in query abcde against candidate 'abcabcabcabcabcabcabczde' we may trigger the miss count before matching de. It'll still be registered as a match and probably a good one with abc at the start, de will be scored as optional characters not present.
Candidate 'abcabcabcabcabcabcabcde' will not have any problem because it does not affect exact match.
A real world example is searching index in the benchmark. Where i, n, d, e exist scattered in folder name, but x exist in the extension .txt. However, the whole point of this project is to prefer structured match to scattered one so this might not be a problem.
[option maxInners, disabled by default]
A lot of the speed of this PR come from the idea that rejection happens often, and we need to be very efficient on them to offset slower higher quality match. Unfortunately, some query will match against almost everything.
However, we may still be too slow for interactive time query on large data set. This is why maxInners option is provided.
This is the maximum number of positive candidate we collect before sorting and returning the list.
The realization is that a query that match everything on a 50K item data set is unlikely to show anything useful to the user above the fold (say in the first 15 results).
So then the priority is to detect such case of low quality (low discrimination power) query and report fast to the user so user can refine its query.
A maxInners size of about 20% of the list works well. It is not needed on a smaller list.
Before the first occurrence of the first char of query in the subject, or after the last occurrence of the last char of query in the subject it is impossible to make a match. So we'll trim the subject to that active region. The search for those boundaries is linear while the optimal alignment algorithm is quadratic, so it is an improvement, however, little or large we move.
All test compare this PR to previous version (legacy)
The first test index is a typical use case, 10% positive, 1/3 of positive are exact matches.
Second test indx remove exact matches. Just under 2x faster
Third test walkdr, 1% positive, mostly testing isMatch(), above 2x faster.
Fourth test node, exact match, 98% positive, bit under 2x faster.
Test 5 nm, exact acronym match, 98% positive, about 10% slower.
Test 6 nodemodules is special in that it use a string that score on almost every candidate, often multiple time per candidate and individuals characters are popular. It also avoid exact match speed-up. About 2x slower, but unlikely to happens in real life. maxInners mitigation cover that case.
Filtering 66672 entries for 'index' took 62ms for 6168 results (~10% of results are positive, mix exact & fuzzy)
Filtering 66672 entries for 'index' took 120ms for 6168 results (~10% of results are positive, Legacy method)
======
Filtering 66672 entries for 'indx' took 69ms for 6192 results (~10% of results are positive, Fuzzy match)
Filtering 66672 entries for 'indx' took 126ms for 6192 results (~10% of results are positive, Fuzzy match, Legacy)
======
Filtering 66672 entries for 'walkdr' took 30ms for 504 results (~1% of results are positive, fuzzy)
Filtering 66672 entries for 'walkdr' took 70ms for 504 results (~1% of results are positive, Legacy method)
======
Filtering 66672 entries for 'node' took 112ms for 65136 results (~98% of results are positive, mostly Exact match)
Filtering 66672 entries for 'node' took 213ms for 65136 results (~98% of results are positive, mostly Exact match, Legacy method)
======
Filtering 66672 entries for 'nm' took 60ms for 65208 results (~98% of results are positive, Acronym match)
Filtering 66672 entries for 'nm' took 56ms for 65208 results (~98% of results are positive, Acronym match, Legacy method)
======
Filtering 66672 entries for 'nodemodules' took 602ms for 65124 results (~98% positive + Fuzzy match, [Worst case scenario])
Filtering 66672 entries for 'nodemodules' took 123ms for 13334 results (~98% positive + Fuzzy match, [Mitigation])
Filtering 66672 entries for 'nodemodules' took 295ms for 65124 results (Legacy)
Q: My results are not as good. A: Run the benchmark a few time, it looks like some optimization kick in later. (Or CPU on energy efficient device might need to warm up before some optimization are activated)
https://github.com/atom/fuzzaldrin/issues/18 -> actionsServiceSpec
https://github.com/atom/atom/issues/7783 -> usa_spec
https://github.com/atom/fuzzy-finder/issues/57#issuecomment-133531653 -> notification
https://github.com/atom/fuzzy-finder/issues/21#issuecomment-48795958 -> video backbone
https://github.com/atom/fuzzy-finder/issues/21#issue-29106280 -> src/app vs destroy_discard
https://github.com/atom/fuzzy-finder/issues/21#issuecomment-46920333 -> email handler
https://github.com/substantial/atomfiles/issues/43 -> model user
https://github.com/atom/fuzzy-finder/issues/21#issuecomment-138664303 -> controller core
https://github.com/atom/fuzzy-finder/issues/57#issue-42120886 -> itc switch / ImportanceTableCtrl
https://github.com/atom/fuzzy-finder/issues/57#issuecomment-95623924 -> application controller
https://github.com/atom/fuzzaldrin/issues/21 -> fft vs FilterFactorTests
https://github.com/atom/command-palette/issues/28 -> Install / Find Select All
https://github.com/atom/fuzzaldrin/issues/20#issue-93279352 -> Git Plus Stage Hunk / Git Plus Push
https://github.com/atom/autocomplete-plus/issues/42 -> downloadThread / DownloadTask
https://github.com/atom/fuzzaldrin/issues/17 -> diagnostics / Diagnostic
https://github.com/atom/fuzzy-finder/issues/91 https://github.com/atom/fuzzaldrin/issues/24
-> PHP Namespaces, let "" match "/" -> (would be nice for config file in mixed OS environment too)
https://github.com/atom/fuzzy-finder/pull/51
-> Ruby Namespaces, let "::" match "/"
https://github.com/atom/fuzzy-finder/issues/10 -> SpaceRegex, let " " match "/" -> was already implemented, posted here to show parallel.
https://github.com/atom/fuzzy-finder/issues/21#issue-29106280 -> we implement suggestion of score based on run length -> todo allows fuzzaldrin to support external knowledge.
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Fuzzy filtering and string similarity scoring - compatible with fuzzaldrin
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