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text-annotator

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text-annotator - npm Package Compare versions

Comparing version 0.7.5 to 0.7.6

19

build/text-annotator.js

@@ -244,5 +244,20 @@ "use strict";

let highlightIndex = -1;
const index = text.indexOf(strWithFixes, offset);
const index = text.indexOf(strWithFixes, offset); // experiment feature: if the text to be searched does not work, try to encode it
if (index !== -1) {
if (index === -1) {
const Entities = require('html-entities').AllHtmlEntities;
const entities = new Entities();
const encodedStrWithFixes = entities.encode(strWithFixes);
const index = text.indexOf(encodedStrWithFixes, offset);
if (index !== -1) {
const loc = [];
loc[0] = index + entities.encode(prefix).length;
loc[1] = loc[0] + entities.encode(str).length;
highlightIndex = this.highlights.push({
loc
}) - 1;
}
} else {
const loc = [];

@@ -249,0 +264,0 @@ loc[0] = index + prefix.length;

7

package.json
{
"name": "text-annotator",
"version": "0.7.5",
"version": "0.7.6",
"description": "A JavaScript library for locating and annotating plain text in HTML",

@@ -88,3 +88,6 @@ "main": "build/text-annotator.js",

"test"
]
],
"dependencies": {
"html-entities": "^1.3.1"
}
}

2

public/js/text-annotator.min.js

@@ -1,1 +0,1 @@

var TextAnnotator=function(t){var e={};function n(i){if(e[i])return e[i].exports;var s=e[i]={i:i,l:!1,exports:{}};return t[i].call(s.exports,s,s.exports,n),s.l=!0,s.exports}return n.m=t,n.c=e,n.d=function(t,e,i){n.o(t,e)||Object.defineProperty(t,e,{enumerable:!0,get:i})},n.r=function(t){"undefined"!=typeof Symbol&&Symbol.toStringTag&&Object.defineProperty(t,Symbol.toStringTag,{value:"Module"}),Object.defineProperty(t,"__esModule",{value:!0})},n.t=function(t,e){if(1&e&&(t=n(t)),8&e)return t;if(4&e&&"object"==typeof t&&t&&t.__esModule)return t;var i=Object.create(null);if(n.r(i),Object.defineProperty(i,"default",{enumerable:!0,value:t}),2&e&&"string"!=typeof t)for(var s in t)n.d(i,s,function(e){return t[e]}.bind(null,s));return i},n.n=function(t){var e=t&&t.__esModule?function(){return t.default}:function(){return t};return n.d(e,"a",e),e},n.o=function(t,e){return Object.prototype.hasOwnProperty.call(t,e)},n.p="",n(n.s=0)}([function(t,e,n){t.exports=n(1).default},function(t,e,n){"use 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e&&e[0].length>0},c=t=>t.length<=3||r(t),a=(t,e)=>{if(e.length>0){if(t<5&&e[0].length<6&&r(e[0]))return!0;return e.filter(t=>/[A-Z]/.test(t.charAt(0))).length>=3}return!1},g=(t,e)=>(e&&(t=t.slice(e-1,e+2)),!isNaN(t)),u=t=>t.match(/^(?:(?:\+?1\s*(?:[.-]\s*)?)?(?:\(\s*([2-9]1[02-9]|[2-9][02-8]1|[2-9][02-8][02-9])\s*\)|([2-9]1[02-9]|[2-9][02-8]1|[2-9][02-8][02-9]))\s*(?:[.-]\s*)?)?([2-9]1[02-9]|[2-9][02-9]1|[2-9][02-9]{2})\s*(?:[.-]\s*)?([0-9]{4})(?:\s*(?:#|x\.?|ext\.?|extension)\s*(\d+))?$/),d=t=>t.match(/[-a-zA-Z0-9@:%._+~#=]{2,256}\.[a-z]{2,6}\b([-a-zA-Z0-9@:%_+.~#?&//=]*)/),f=t=>{let e=0;if((e=t.indexOf("."))>-1||(e=t.indexOf("!"))>-1||(e=t.indexOf("?"))>-1){if(t.charAt(e+1).match(/[a-zA-Z].*/))return[t.slice(0,e+1),t.slice(e+1)]}return!1},p=(t,e)=>e.length>1?e.indexOf(t.slice(-1))>-1:t.slice(-1)===e,m=(t,e)=>t.slice(t.length-e.length)===e;function b(t,e){const n=" @~@ ".trim(),r=new RegExp("\\S",""),b=new RegExp("\\n+|[-#=_+*]{4,}","g"),T=new RegExp("\\S+|\\n","g");if(!t||"string"!=typeof t||!t.length)return[];if(!r.test(t))return[];const L={newline_boundaries:!1,html_boundaries:!1,html_boundaries_tags:["p","div","ul","ol"],sanitize:!1,allowed_tags:!1,preserve_whitespace:!1,abbreviations:null};if("boolean"==typeof e)L.newline_boundaries=!0;else for(let t in e)L[t]=e[t];var x;if(x=L.abbreviations,i=x||s,L.newline_boundaries&&(t=t.replace(b," @~@ ")),L.html_boundaries){const e="(<br\\s*\\/?>|<\\/("+L.html_boundaries_tags.join("|")+")>)",n=new RegExp(e,"g");t=t.replace(n,"$1 @~@ ")}let M,w;(L.sanitize||L.allowed_tags)&&(L.allowed_tags||(L.allowed_tags=[""]),t=(t=>{if(("string"==typeof t||t instanceof String)&&"undefined"!=typeof document){const e=document.createElement("DIV");e.innerHTML=t,t=(e.textContent||"").trim()}else"object"==typeof t&&t.textContent&&(t=(t.textContent||"").trim());return t})(t,L.allowed_tags)),L.preserve_whitespace?(w=t.split(/(<br\s*\/?>|\S+|\n+)/),M=w.filter((t,e)=>e%2)):M=t.trim().match(T);let S=0,y=0,v=[],C=[],O=[];if(!M||!M.length)return[];let _=0;for(let t=0,e=M.length;t<e;t++){if(S++,O.push(M[t]),~M[t].indexOf(",")&&(S=0),"."===(j=M[t])||"!"===j||"?"===j||p(M[t],"?!")||M[t]===n){(L.newline_boundaries||L.html_boundaries)&&M[t]===n&&O.pop(),C.push(O),S=0,O=[];continue}if((p(M[t],'"')||p(M[t],"”"))&&(M[t]=M[t].slice(0,-1),y=2*t+1),p(M[t],".")){if(t+1<e){if(2===M[t].length&&isNaN(M[t].charAt(0)))continue;if(H=M[t],~i.indexOf(H.replace(/\W+/g,"")))continue;if(o(M[t+1])){if(l(M[t],M[t+1]))continue;if(a(S,M.slice(t,6)))continue;if(g(M[t+1])&&c(M[t]))continue}else{if(m(M[t],".."))continue;if(h(M[t]))continue;if(a(S,M.slice(t,5)))continue}}C.push(O),O=[],S=0;continue}if((y=M[t].indexOf("."))>-1){if(g(M[t],y))continue;if(h(M[t]))continue;if(d(M[t])||u(M[t]))continue}const s=f(M[t]);s&&(v=s,O.pop(),O.push(v[0]),C.push(O),L.preserve_whitespace&&(w.splice(2*t+1+_,1,v[0],"",v[1]),_+=2),O=[],S=0,O.push(v[1]))}var H,j;O.length&&C.push(O);const I=[];let A="";C=C.filter((function(t){return t.length>0}));for(let t=0;t<C.length;t++){if(!L.preserve_whitespace||L.newline_boundaries||L.html_boundaries)A=C[t].join(" ");else{let e=2*C[t].length;0===t&&(e+=1),A=w.splice(0,e).join("")}1===C[t].length&&C[t][0].length<4&&C[t][0].indexOf(".")>-1&&C[t+1]&&C[t+1][0].indexOf(".")<0&&(A+=" "+C[t+1].join(" "),t++),I.push(A)}return I}const T="undefined"!=typeof window&&void 0!==window.document,L=["address","article","aside","blockquote","canvas","dd","div","dl","dt","fieldset","figcaption","figure","footer","form","h1","h2","h3","h4","h5","h6","header","hgroup","hr","li","main","nav","noscript","ol","output","p","pre","section","table","tfoot","ul","video"];class x{constructor(t={}){const e=t.containerId,n=t.content,i=void 0===t.isHTML||t.isHTML;this.originalContent=T&&e?document.getElementById(e).innerHTML:n,this.isHTML=i,this.stripedHTML="",this.tagLocations=[],this.sentences=[],this.highlights=[],i&&this.stripAndStoreHTMLTags()}search(t,e={},n){let i=e.prefix||"",s=e.postfix||"";const r=e.directSearchOptions,o=e.fuzzySearchOptions,l=e.eagerSearchOptions;if(void 0===e.trim||e.trim){const e=x.trim(i,t,s);i=e.prefix,t=e.str,s=e.postfix}let h=-1;return h=this.directSearch(i,t,s,r,n),-1!==h||o&&(h=this.fuzzySearch(i,t,s,o),-1!==h)||T&&l&&(h=this.eagerSearch(i,t,s,l)),h}searchAll(t,e={}){const n=[],i=(t,e,s)=>{const r=this.search(t,e,s);-1!==r&&(n.push(r),i(t,e,r))};return i(t,e),n}highlight(t,e={}){const n=e.containerId;let i=e.content;const s=e.highlightClass||"highlight",r=e.highlightIdPattern||"highlight-",o=e.returnContent;T&&n&&(i=document.getElementById(n).innerHTML);const l=x.createOpenTag(r,t,s),h=this.adjustLoc(r,t,s);let c=x.insert(i,l,h[0]);if(c=x.insert(c,x.createCloseTag(),h[1]+l.length),this.highlights[t].highlighted=!0,!T||!n||o)return c;document.getElementById(n).innerHTML=c}highlightAll(t,e={}){const{containerId:n,content:i,returnContent:s}=e;let r=T&&n?document.getElementById(n).innerHTML:i;for(let n=0;n<t.length;n++){const i=Object.assign({},e);delete i.containerId,i.content=r,i.returnContent=!0,r=this.highlight(t[n],i)}if(!T||!n||s)return r;document.getElementById(n).innerHTML=r}searchAndHighlight(t,e){const n=this.search(t,e.searchOptions);if(-1!==n)return{highlightIndex:n,content:this.highlight(n,e.highlightOptions)}}unhighlight(t,e={}){const n=e.byStringOperation,i=e.containerId;let s=e.content;const r=e.highlightClass||"highlight",o=e.highlightIdPattern||"highlight-",l=e.returnContent;if(this.highlights[t].highlighted=!1,n){T&&i&&(s=document.getElementById(i).innerHTML);let e=s;const n=this.adjustLoc(o,t,r),h=x.getOpenTagLength(o,t,r),c=e.substring(n[0],n[1]+h+x.getCloseTagLength()),a=e.substring(n[0]+h,n[1]+h);if(e=e.replace(c,a),l)return e;document.getElementById(i).innerHTML=e}else if(T){const e=o+t;if(document.getElementById(e).outerHTML=document.getElementById(e).innerHTML,l)return document.getElementById(i).innerHTML}}stripAndStoreHTMLTags(){let t;this.stripedHTML=this.originalContent;const e=/<[^>]+>/;let n=0;for(;t=this.stripedHTML.match(e);){this.stripedHTML=this.stripedHTML.replace(t,"");const e=t[0].length;this.tagLocations.push([t.index,e,n]),n+=e}}directSearch(t,e,n,i={},s){const r=i.caseSensitive;let o=t+e+n,l=this.isHTML?this.stripedHTML:this.originalContent;r||(o=o.toLowerCase(),l=l.toLowerCase());let h=0;void 0!==s&&(h=this.highlights[s].loc[1]+1);let c=-1;const a=l.indexOf(o,h);if(-1!==a){const n=[];n[0]=a+t.length,n[1]=n[0]+e.length,c=this.highlights.push({loc:n})-1}return c}eagerSearch(t,e,n,i={}){const s=i.caseSensitive,r=i.containerId,o=i.threshold||.74,l=t+e+n;let h=-1;if(window.find){document.designMode="on";const t=window.getSelection();for(t.collapse(document.body,0);window.find(l,s);){document.execCommand("hiliteColor",!0,"rgba(255, 255, 255, 0)"),t.collapseToEnd();const n=document.querySelector("#"+r+' [style="background-color: rgba(255, 255, 255, 0);"]');if(n){const t=n.innerHTML.replace(/<[^>]*>/g,""),i=x.getBestSubstring(t,e,o);if(i.similarity){const e=(this.isHTML?this.stripedHTML:this.originalContent).indexOf(t);-1!==e&&(h=this.highlights.push({loc:[e+i.loc[0],e+i.loc[1]]})-1)}break}}document.execCommand("undo"),document.designMode="off"}return h}fuzzySearch(t,e,n,i={}){const s=i.caseSensitive,r=i.tokenBased;let o=i.tbThreshold||.68;const l=void 0===i.sentenceBased||i.sentenceBased;let h=i.sbThreshold||.85;const c=i.maxLengthDiff||.1,a=i.lenRatio||2,g=i.processSentence;let u=-1;const d=this.isHTML?this.stripedHTML:this.originalContent;if(r||t||n){const i=[];let r=-1;for(;-1!==(r=d.indexOf(e,r+1));)i.push(r);let l=-1;const h=t+e+n;for(let r=0;r<i.length;r++){const c=i[r],a=d.substring(c-t.length,c)+e+d.substring(c+e.length,c+e.length+n.length),g=x.getSimilarity(a,h,s);g>=o&&(o=g,l=c)}-1!==l&&(u=this.highlights.push({loc:[l,l+e.length]})-1)}else if(l){let t=[];t=this.sentences.length?this.sentences:this.sentences=x.sentenize(d);const 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u}includeRequiredTag(t,e,n){const i=n.startsWith("</"),s=i?n.split("</")[1].split(">")[0]:n.split(" ")[0].split("<")[1].split(">")[0];let r=!1,o=1,l=0;if(i)for(let n=t-1;n>=0;n--){const t=this.tagLocations[n];if(e[0]>t[0])break;{const e=this.originalContent.substring(t[0]+t[2],t[0]+t[2]+t[1]);if(e.startsWith("</"+s)?o++:e.startsWith("<"+s)&&l++,o===l){r=!0;break}}}else for(let n=t+1;n<this.tagLocations.length;n++){const t=this.tagLocations[n];if(e[1]<t[0])break;{const e=this.originalContent.substring(t[0]+t[2],t[0]+t[2]+t[1]);if(e.startsWith("<"+s)?o++:e.startsWith("</"+s)&&l++,o===l){r=!0;break}}}return r}adjustLoc(t,e,n){const i=this.highlights[e].loc,s=[0,0],r=this.tagLocations.length;for(let t=0;t<r;t++){const e=this.tagLocations[t];if(i[1]<e[0])break;if(i[1]===e[0]){const n=this.originalContent.substring(e[0]+e[2],e[0]+e[2]+e[1]);!n.endsWith("/>")&&n.startsWith("</")&&!L.includes(n.split("</")[1].split(">")[0])&&this.includeRequiredTag(t,i,n)&&(s[1]+=e[1])}else if(i[1]>e[0])if(s[1]+=e[1],i[0]===e[0]){const n=this.originalContent.substring(e[0]+e[2],e[0]+e[2]+e[1]);(n.startsWith("</")||n.endsWith("/>")||L.includes(n.split(" ")[0].split("<")[1].split(">")[0])||!this.includeRequiredTag(t,i,n))&&(s[0]+=e[1])}else i[0]>e[0]&&(s[0]+=e[1])}for(let e=0;e<this.highlights.length;e++){const r=this.highlights[e];if(r.highlighted){const o=x.getOpenTagLength(t,e,n),l=x.getCloseTagLength(),h=r.loc;i[0]>=h[1]?(s[0]+=o+l,s[1]+=o+l):i[0]<h[1]&&i[0]>h[0]&&i[1]>h[1]?(s[0]+=o,s[1]+=o+l):i[0]<=h[0]&&i[1]>=h[1]?s[1]+=o+l:i[0]<h[0]&&i[1]>h[0]&&i[1]<h[1]?s[1]+=o:i[0]>=h[0]&&i[1]<=h[1]&&(s[0]+=o,s[1]+=o)}}return[i[0]+s[0],i[1]+s[1]]}static createOpenTag(t,e,n){return`<span id="${t+e}" class="${n}">`}static createCloseTag(){return"</span>"}static getOpenTagLength(t,e,n){return x.createOpenTag(t,e,n).length}static getCloseTagLength(){return x.createCloseTag().length}static trim(t,e,n){return t=t.replace(/^\s+/,""),n=n.replace(/\s+$/,""),t||(e=e.replace(/^\s+/,"")),n||(e=e.replace(/\s+$/,"")),{prefix:t,str:e,postfix:n}}static insert(t,e,n){return t.slice(0,n)+e+t.slice(n)}static sentenize(t){return b(t,{newline_boundaries:!1,html_boundaries:!1,sanitize:!1,allowed_tags:!1,preserve_whitespace:!0,abbreviations:null}).map(e=>({raw:e,index:t.indexOf(e)}))}static getBestSubstring(t,e,n,i,s,r){let o={},l=r?n:x.getSimilarity(t,e,s);if(l>=n){const n=t.split(" ");for(;n.length;){const t=n.shift(),i=n.join(" ");let r=x.getSimilarity(i,e,s);if(r<l){n.unshift(t);const i=n.pop();if(r=x.getSimilarity(n.join(" "),e,s),r<l){n.push(i);break}l=r}else l=r}const r=n.join(" ");if(!i||r.length/e.length<=i){const e=[];e[0]=t.indexOf(r),e[1]=e[0]+r.length,o={similarity:l,loc:e}}}return o}static getSimilarity(t,e,n){return n||(t=t.toLowerCase(),e=e.toLowerCase()),t===e?1:x.lcsLength(t,e)/e.length}static lcsLength(t,e,n){var i=n?t:t.toLowerCase(),s=n?e:e.toLowerCase();if(i===s)return 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i=r.directSearchOptions,a=r.fuzzySearchOptions,s=r.eagerSearchOptions;if(void 0===r.trim||r.trim){const r=q.trim(n,e,o);n=r.prefix,e=r.str,o=r.postfix}let l=-1;return l=this.directSearch(n,e,o,i,t),-1!==l||a&&(l=this.fuzzySearch(n,e,o,a),-1!==l)||w&&s&&(l=this.eagerSearch(n,e,o,s)),l}searchAll(e,r={}){const t=[],n=(e,r,o)=>{const i=this.search(e,r,o);-1!==i&&(t.push(i),n(e,r,i))};return n(e,r),t}highlight(e,r={}){const t=r.containerId;let n=r.content;const o=r.highlightClass||"highlight",i=r.highlightIdPattern||"highlight-",a=r.returnContent;w&&t&&(n=document.getElementById(t).innerHTML);const s=q.createOpenTag(i,e,o),l=this.adjustLoc(i,e,o);let c=q.insert(n,s,l[0]);if(c=q.insert(c,q.createCloseTag(),l[1]+s.length),this.highlights[e].highlighted=!0,!w||!t||a)return c;document.getElementById(t).innerHTML=c}highlightAll(e,r={}){const{containerId:t,content:n,returnContent:o}=r;let i=w&&t?document.getElementById(t).innerHTML:n;for(let t=0;t<e.length;t++){const n=Object.assign({},r);delete n.containerId,n.content=i,n.returnContent=!0,i=this.highlight(e[t],n)}if(!w||!t||o)return i;document.getElementById(t).innerHTML=i}searchAndHighlight(e,r){const t=this.search(e,r.searchOptions);if(-1!==t)return{highlightIndex:t,content:this.highlight(t,r.highlightOptions)}}unhighlight(e,r={}){const t=r.byStringOperation,n=r.containerId;let o=r.content;const i=r.highlightClass||"highlight",a=r.highlightIdPattern||"highlight-",s=r.returnContent;if(this.highlights[e].highlighted=!1,t){w&&n&&(o=document.getElementById(n).innerHTML);let r=o;const t=this.adjustLoc(a,e,i),l=q.getOpenTagLength(a,e,i),c=r.substring(t[0],t[1]+l+q.getCloseTagLength()),u=r.substring(t[0]+l,t[1]+l);if(r=r.replace(c,u),s)return r;document.getElementById(n).innerHTML=r}else if(w){const r=a+e;if(document.getElementById(r).outerHTML=document.getElementById(r).innerHTML,s)return document.getElementById(n).innerHTML}}stripAndStoreHTMLTags(){let e;this.stripedHTML=this.originalContent;const r=/<[^>]+>/;let t=0;for(;e=this.stripedHTML.match(r);){this.stripedHTML=this.stripedHTML.replace(e,"");const r=e[0].length;this.tagLocations.push([e.index,r,t]),t+=r}}directSearch(e,r,n,o={},i){const a=o.caseSensitive;let s=e+r+n,l=this.isHTML?this.stripedHTML:this.originalContent;a||(s=s.toLowerCase(),l=l.toLowerCase());let c=0;void 0!==i&&(c=this.highlights[i].loc[1]+1);let u=-1;const p=l.indexOf(s,c);if(-1===p){const n=new(0,t(1).AllHtmlEntities),o=n.encode(s),i=l.indexOf(o,c);if(-1!==i){const t=[];t[0]=i+n.encode(e).length,t[1]=t[0]+n.encode(r).length,u=this.highlights.push({loc:t})-1}}else{const t=[];t[0]=p+e.length,t[1]=t[0]+r.length,u=this.highlights.push({loc:t})-1}return u}eagerSearch(e,r,t,n={}){const o=n.caseSensitive,i=n.containerId,a=n.threshold||.74,s=e+r+t;let l=-1;if(window.find){document.designMode="on";const e=window.getSelection();for(e.collapse(document.body,0);window.find(s,o);){document.execCommand("hiliteColor",!0,"rgba(255, 255, 255, 0)"),e.collapseToEnd();const t=document.querySelector("#"+i+' [style="background-color: rgba(255, 255, 255, 0);"]');if(t){const e=t.innerHTML.replace(/<[^>]*>/g,""),n=q.getBestSubstring(e,r,a);if(n.similarity){const r=(this.isHTML?this.stripedHTML:this.originalContent).indexOf(e);-1!==r&&(l=this.highlights.push({loc:[r+n.loc[0],r+n.loc[1]]})-1)}break}}document.execCommand("undo"),document.designMode="off"}return l}fuzzySearch(e,r,t,n={}){const o=n.caseSensitive,i=n.tokenBased;let a=n.tbThreshold||.68;const s=void 0===n.sentenceBased||n.sentenceBased;let l=n.sbThreshold||.85;const c=n.maxLengthDiff||.1,u=n.lenRatio||2,p=n.processSentence;let g=-1;const h=this.isHTML?this.stripedHTML:this.originalContent;if(i||e||t){const n=[];let i=-1;for(;-1!==(i=h.indexOf(r,i+1));)n.push(i);let s=-1;const l=e+r+t;for(let i=0;i<n.length;i++){const c=n[i],u=h.substring(c-e.length,c)+r+h.substring(c+r.length,c+r.length+t.length),p=q.getSimilarity(u,l,o);p>=a&&(a=p,s=c)}-1!==s&&(g=this.highlights.push({loc:[s,s+r.length]})-1)}else if(s){let e=[];e=this.sentences.length?this.sentences:this.sentences=q.sentenize(h);const t=r.split(/\s/),n=[];for(let r=0;r<e.length;r++)for(let o=0;o<t.length;o++)if(e[r].raw.includes(t[o])){n.push(e[r]);break}if(p){let e=0;for(let r=0;r<n.length;r++){const t=n[r];let o=t.raw;const i=[t.index,t.index+o.length];let a=0;const s=this.tagLocations;for(let r=e;r<s.length;r++){const t=s[r];if(t[0]>=i[0]&&t[0]<=i[1]){const e=this.originalContent.substring(t[0]+t[2],t[0]+t[2]+t[1]),r=t[0]+a-i[0];o=o.slice(0,r)+e+o.slice(r),a+=t[1]}else if(t[0]>i[1]){e=r;break}}o=p(o),o=o.replace(/(<([^>]+)>)/gi,"");const l=t.raw;l!==o&&(t.raw=o,t.index=t.index+l.indexOf(o))}}let i=null;for(let e=0;e<n.length;e++){const t=n[e],a=q.getSimilarity(t.raw,r,o);if(a>=l)l=a,i=t;else if(e!==n.length-1){const a=t.raw+n[e+1].raw;if(Math.abs(a.length-r.length)/r.length<=c){const e=q.getSimilarity(a,r,o);e>=l&&(l=e,i={raw:a,index:t.index})}}}if(i){const e=q.getBestSubstring(i.raw,r,l,u,o,!0);if(e.loc){let r=i.index;g=this.highlights.push({loc:[r+e.loc[0],r+e.loc[1]]})-1}}}return g}includeRequiredTag(e,r,t){const n=t.startsWith("</"),o=n?t.split("</")[1].split(">")[0]:t.split(" ")[0].split("<")[1].split(">")[0];let i=!1,a=1,s=0;if(n)for(let t=e-1;t>=0;t--){const e=this.tagLocations[t];if(r[0]>e[0])break;{const r=this.originalContent.substring(e[0]+e[2],e[0]+e[2]+e[1]);if(r.startsWith("</"+o)?a++:r.startsWith("<"+o)&&s++,a===s){i=!0;break}}}else for(let t=e+1;t<this.tagLocations.length;t++){const e=this.tagLocations[t];if(r[1]<e[0])break;{const r=this.originalContent.substring(e[0]+e[2],e[0]+e[2]+e[1]);if(r.startsWith("<"+o)?a++:r.startsWith("</"+o)&&s++,a===s){i=!0;break}}}return i}adjustLoc(e,r,t){const n=this.highlights[r].loc,o=[0,0],i=this.tagLocations.length;for(let e=0;e<i;e++){const r=this.tagLocations[e];if(n[1]<r[0])break;if(n[1]===r[0]){const t=this.originalContent.substring(r[0]+r[2],r[0]+r[2]+r[1]);!t.endsWith("/>")&&t.startsWith("</")&&!v.includes(t.split("</")[1].split(">")[0])&&this.includeRequiredTag(e,n,t)&&(o[1]+=r[1])}else if(n[1]>r[0])if(o[1]+=r[1],n[0]===r[0]){const t=this.originalContent.substring(r[0]+r[2],r[0]+r[2]+r[1]);(t.startsWith("</")||t.endsWith("/>")||v.includes(t.split(" ")[0].split("<")[1].split(">")[0])||!this.includeRequiredTag(e,n,t))&&(o[0]+=r[1])}else n[0]>r[0]&&(o[0]+=r[1])}for(let r=0;r<this.highlights.length;r++){const i=this.highlights[r];if(i.highlighted){const a=q.getOpenTagLength(e,r,t),s=q.getCloseTagLength(),l=i.loc;n[0]>=l[1]?(o[0]+=a+s,o[1]+=a+s):n[0]<l[1]&&n[0]>l[0]&&n[1]>l[1]?(o[0]+=a,o[1]+=a+s):n[0]<=l[0]&&n[1]>=l[1]?o[1]+=a+s:n[0]<l[0]&&n[1]>l[0]&&n[1]<l[1]?o[1]+=a:n[0]>=l[0]&&n[1]<=l[1]&&(o[0]+=a,o[1]+=a)}}return[n[0]+o[0],n[1]+o[1]]}static createOpenTag(e,r,t){return`<span id="${e+r}" class="${t}">`}static createCloseTag(){return"</span>"}static getOpenTagLength(e,r,t){return q.createOpenTag(e,r,t).length}static getCloseTagLength(){return q.createCloseTag().length}static trim(e,r,t){return e=e.replace(/^\s+/,""),t=t.replace(/\s+$/,""),e||(r=r.replace(/^\s+/,"")),t||(r=r.replace(/\s+$/,"")),{prefix:e,str:r,postfix:t}}static insert(e,r,t){return e.slice(0,t)+r+e.slice(t)}static sentenize(e){return b(e,{newline_boundaries:!1,html_boundaries:!1,sanitize:!1,allowed_tags:!1,preserve_whitespace:!0,abbreviations:null}).map(r=>({raw:r,index:e.indexOf(r)}))}static getBestSubstring(e,r,t,n,o,i){let a={},s=i?t:q.getSimilarity(e,r,o);if(s>=t){const t=e.split(" ");for(;t.length;){const e=t.shift(),n=t.join(" ");let i=q.getSimilarity(n,r,o);if(i<s){t.unshift(e);const n=t.pop();if(i=q.getSimilarity(t.join(" "),r,o),i<s){t.push(n);break}s=i}else s=i}const i=t.join(" ");if(!n||i.length/r.length<=n){const r=[];r[0]=e.indexOf(i),r[1]=r[0]+i.length,a={similarity:s,loc:r}}}return a}static getSimilarity(e,r,t){return t||(e=e.toLowerCase(),r=r.toLowerCase()),e===r?1:q.lcsLength(e,r)/r.length}static lcsLength(e,r,t){var n=t?e:e.toLowerCase(),o=t?r:r.toLowerCase();if(n===o)return n;if(""===(n||o))return"";var i,a,s=n.length,l=o.length,c=function(e){for(var r=[],t=0;t<e;t++)r[t]=[];return r}(l+1);for(i=0;i<=s;i++)c[0][i]=0;for(i=0;i<=l;i++)c[i][0]=0;for(i=1;i<=l;i++)for(a=1;a<=s;a++)n[a-1]===o[i-1]?c[i][a]=c[i-1][a-1]+1:c[i][a]=Math.max(c[i-1][a],c[i][a-1]);var u="";for(i=l,a=s;i>0&&a>0;)n[a-1]===o[i-1]?(u=n[a-1]+u,i--,a--):Math.max(c[i-1][a],c[i][a-1])===c[i-1][a]?i--:a--;return u.length}}r.default=q}]);

52

README.md
# text-annotator
A JavaScript library for locating and annotating plain text in HTML
A JavaScript library for locating and annotating plain text in the HTML<br />
The annotation process is:
1. Search for the plain text in the HTML; if finding it, store the location identified by an index and then return the index
2. Annotate the found text given its index
It can be seen that to annotate a piece of text, the process is search -> annotate. The idea of decomposing the annotation process is to allow more flexibility, e.g., the user can search all necessary text first, and then annotate/highlight it when required (e.g., when clicking a button). There is a function for directly annotating the text
## Examples
## Import
1. via npm
`npm install --save text-annotator`
```javascript
import TextAnnotator from 'text-annotator'
```
2. include into head tag
```
<script src="public/js/text-annotator.min.js"></script>
```
## Basic usage
<p id="content">"I am <b><i>Zhan Huang</i></b>, a <b>frontend developer</b> in EMBL-EBI. I like <b>food</b> and <b>sports</b>. My favourite food is <b>udon&nbsp;noodles</b> and my favourite sports are <b>badminton</b> and <b>football</b>. Let us be friends!" - Zhan Huang</p>
```javascript
// create an instance of TextAnnotator
// containerId is the id of the HTML container
var containerObj = {containerId: 'content'}
var annotator = new TextAnnotator(containerObj)
// search for the text in HTML
// if found, store the location of the text and then return the index; otherwise return -1
var highlightIndex = annotator.search('frontend developer')
// annotate
if (highlightIndex !== -1) {
annotator.highlight(highlightIndex, containerObj)
}
// search all occurances of the text
var indexes = annotator.search('Zhan Huang')
if (highlightIndexes.length) {
// show all annotations given their indexes
annotator.highlightAll(highlightIndexes, containerObj)
}
// search and annotate
annotator.searchAndHighlight('badminton and football', {highlightOptions: containerObj})
// remove the annotation by the index
annotator.unhighlight(highlightIndex)
```
## Options
## Examples from Europe PMC
text-annotator has been widely used in [Europe PMC](https://europepmc.org "Europe PMC"), an open science platform that enables access to a worldwide collection of life science publications. Here is a list of examples:

@@ -6,0 +54,0 @@ 1. Article title highlighting: https://europepmc.org/search?query=cancer

14

src/text-annotator.js

@@ -324,3 +324,15 @@ import getSentences from './ext/sbd'

const index = text.indexOf(strWithFixes, offset)
if (index !== -1) {
// experiment feature: if the text to be searched does not work, try to encode it
if (index === -1) {
const Entities = require('html-entities').AllHtmlEntities
const entities = new Entities()
const encodedStrWithFixes = entities.encode(strWithFixes)
const index = text.indexOf(encodedStrWithFixes, offset)
if (index !== -1) {
const loc = []
loc[0] = index + entities.encode(prefix).length
loc[1] = loc[0] + entities.encode(str).length
highlightIndex = this.highlights.push({ loc }) - 1
}
} else {
const loc = []

@@ -327,0 +339,0 @@ loc[0] = index + prefix.length

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