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ajo2995

npm

3.06K

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Packages

Current Co-maintainers

Former Co-maintainers

28 packages

cmpbitvec

Word Aligned Hybrid Compressed Bit Vector module

fastbit

node interface to (some) FastBit C++ functions

gramene-alerts

alerts React component

gramene-anatomogram

React 18 anatomogram (tissue SVGs) for Expression Atlas heatmaps. Gramene fork of @ebi-gene-expression-group/anatomogram 2.4.0

gramene-atlas-heatmap

Warelab/Gramene fork of the EMBL-EBI Expression Atlas heatmap (atlas-heatmap 5.7.2): baseline and differential expression heatmaps for React 18 and react-bootstrap 2

gramene-bedify

transforms gramene JSON genes into tab delimited bed

gramene-bins-client

Provide API for working with gene distribution bins provided by data.gramene.org/genes

gramene-client-cache

Browser-only cache intended to reduce the amount of queries that gramoogle makes to gramene-search-client

gramene-dalliance

Fast, embeddable genome visualization

gramene-dbxrefs

Provide API for dbxrefs

gramene-efp-browser

gramene-efp-browser React component

gramene-gene-positions

remap between genome, gene, transcript, and protein coordinates

gramene-genetree-vis

Visualize a genetree using d3. t123

gramene-githubdocs

React component that renders a tree of Markdown files from a GitHub repo, with subdirectories as navigation levels

gramene-mdview

mdview React component

gramene-mongodb-config

Javascript module with configuration settings for Gramene's mongodb collections

gramene-primers

Embeddable React component and headless client for Gramene PCR/qPCR primer design, genome specificity and pan-genome coverage checks.

gramene-search

search wrapper for gramene

gramene-search-client

Javascript client for searching Gramene's API

gramene-search-vis

Visualization used by Gramene search

gramene-swagger

Gramene API - Made using swagger

gramene-taxonomy-with-genomes

Integrate gramene-trees-client taxonomy with gramene-bins-client

gramene-trees-client

Provide API for trees

gramene-videos

gramene-videos React component

sorghum-search

search wrapper for sorghumbase