A Python utility library to estimate, compare, and reweight RNA energetics across many secondary structure algorithms.
Python API to compute RNA energetics and do structure prediction across multiple secondary structure packages.
arnie is available on PyPI.
pip install arnie
src/arnie: source code for the arnie package.
docs: docsify-based markdown documentation for the arnie package.
tests: unit tests
notebooks: example jupyter notebooks with usage.
scripts: scripts for processing sequences in batch.
parameter_files: dir of various parameter files for packages, put here out of convenience.
(c) 2024 Leland Stanford Jr University Authors: Hannah Wayment-Steele
FAQs
A Python utility library to estimate, compare, and reweight RNA energetics across many secondary structure algorithms.
We found that arnie demonstrated a healthy version release cadence and project activity because the last version was released less than a year ago. It has 1 open source maintainer collaborating on the project.
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