This module provides functions for plotting data extracted from Oxford Nanopore sequencing reads and alignments, but some of it's functions can also be used for other applications.
checkvalidColor(color)checkvalidFormat(format)scatter(x, y, names, path, color, format, plots, stat=None, log=False, minvalx=0, minvaly=0)timePlots(df, path, color, format)lengthPlots(array, name, path, n50, color, format, log=False)makeLayout()spatialHeatmap(array, title, path, color, format)pip install nanoplotter
or
conda install -c bioconda nanoplotter
If you use this tool, please consider citing our publication.
FAQs
Plotting functions of Oxford Nanopore sequencing data
We found that nanoplotter demonstrated a healthy version release cadence and project activity because the last version was released less than a year ago. It has 1 open source maintainer collaborating on the project.
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