In addition to python, these utilities require some additional modules.
To install these modules, type the following commands:
pip install requests
pip install requests-toolbelt
pip install ndex
Utility Scripts:
In all scripts that have arguments username and password, these will be the username and password for the NDEx account that you are using.
upload-to-ndex.py
python upload-to-ndex.py <username> <password> <directory>
Where directory contains all of the network files you want to upload.
create_network_from_tsv.py
python create_network_from_tsv.py <username> <password> <ndex server> <tsv file> <import plan file> <network name> <network description>
change_network_descriptions.py
change_network_versions.py
make_networks_public.py
make_networks_private.py
delete_all_networks.py
get_user_account_statistics.py
download_pc_pathways.py
download_pc_pathways.py <datasource> <format>
FAQs
NDEx Python utilities. Includes file conversion and importing functions
We found that ndex-utils-dev demonstrated a healthy version release cadence and project activity because the last version was released less than a year ago. It has 1 open source maintainer collaborating on the project.
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