This package focuses on studying molecular structures and their dynamics using a simple yet informative property known as Protein Packing. Over the last few years, we have worked on several techniques to capture and quantify the protein packing, resulting in a few publications. This package has all the code to repeat and further develop these techniques.
pip install py-packman
git clone https://github.com/Pranavkhade/PACKMAN
cd PACKMAN
python setup.py install
PACKMAN, along with its components, can be accessed via Graphical User Interface (GUI), Command-line Interface (CLI), and Application programming interface (API).
For the GUI, please run the following command.
python -m packman gui
OR
python3 -m packman gui
For the CLI and API, please read the tutorials & documentation.
Click here to report issues with any aspect of the package. Please search for the resolved issues first.
The development of the PACKMAN package webservers are supported by NSF grant DBI 1661391. The authors also thank ResearchIT@Iowa State University for helping with many aspects of computing.
FAQs
A software package for molecular PACKing and Motion ANalysis (PACKMAN)
We found that py-packman demonstrated a healthy version release cadence and project activity because the last version was released less than a year ago. It has 1 open source maintainer collaborating on the project.
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