Provides a Python API to manipulate the MIP analysis pipeline: setup, starting, monitoring, and parsing output.
After a case has been solved or abandoned it is necessary to wrap up the analysis and archive the results. Pymip will handle this task by bundling the most vital assets from the output and deleting the rest.
Assets that are kept:
Pymip will not touch any of the files under "exomes/genomes" only "analysis". Physically the files will be collected in a folder under "exomes/genomes" names "archive". The script will also update the AnalysisRunStatus in the QC sample info file to Archived.
$ pip install --editable .
Anyone can help make this project better - read CONTRIBUTING to get started!
MIT. See the LICENSE file for more details.
FAQs
Provides a Python API to manipulate MIP
We found that pymip demonstrated a healthy version release cadence and project activity because the last version was released less than a year ago. It has 1 open source maintainer collaborating on the project.
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