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@gmod/bam

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@gmod/bam - npm Package Versions

1
8

1.0.27

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1.0.27 (2019-10-10)

  • Make feature IDs become generated based relative to the exact bgzip block

<a name="1.0.26"></a>

cmdcolin
published 1.0.26 •

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1.0.26 (2019-10-01)

  • Restore issue with getRecordsForRange not returning all features (#44)
  • Fix compatibility with electron (#43)
  • Fix usage of feature.get('seq')

<a name="1.0.25"></a>

cmdcolin
published 1.0.25 •

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1.0.25 (2019-09-29)

  • Fixed some typescript typings

<a name="1.0.24"></a>

cmdcolin
published 1.0.24 •

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1.0.24 (2019-09-27)

  • Added typescript typings

<a name="1.0.23"></a>

cmdcolin
published 1.0.22 •

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1.0.22 (2019-09-27)

  • Added typescript typings
  • Botched release, was removed from npm

<a name="1.0.22"></a>

cmdcolin
published 1.0.21 •

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1.0.21 (2019-08-06)

  • Add a fix for the small chunk unpacking re-seeking in the same bgzf block repeatedly (#35)

<a name="1.0.20"></a>

cmdcolin
published 1.0.20 •

Changelog

Source

1.0.20 (2019-06-06)

  • Added a method for smaller chunk unpacking, by modifying the header parsing to return smaller chunks and the bgzf unzipping to respect chunk boundaries (#30)
  • Use fileOffset as bam feature ID which previously was crc32 of the BAM buffer which consequently speeds up processing and allows exact duplicate features
cmdcolin
published 1.0.19 •

Changelog

Source

1.0.19 (2019-05-30)

  • Added lineCount and hasRefSeq functions to BamFile, each accepting a string seqName
  • Fixed aborting on index retrieval code
cmdcolin
published 1.0.18 •

Changelog

Source

1.0.18 (2019-05-01)

  • Bump generic-filehandle to 1.0.9 to fix error with using native fetch (global fetch needed to be bound)
  • Bump abortable-promise-cache to 1.0.1 version to fix error with using native fetch and abort signals
cmdcolin
published 1.0.17 •

Changelog

Source

1.0.17 (2019-04-28)

  • Fix wrong number of arguments being passed to the readRefSeqs file read() invocation resulting in bad range requests
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