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@gmod/bam

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@gmod/bam - npm Package Versions

1
68

1.0.16

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1.0.16 (2019-04-28)

  • Added indexCov algorithm to retrieve approximate coverage of the BAM inferred from the size of the BAI linear index bins
  • Fixed abortSignal on read() calls
  • Updated API to allow bamUrl/baiUrl/csiUrl
cmdcolin
published 1.0.15 •

Changelog

Source

1.0.15 (2019-04-04)

  • Added check for too large of chromosomes in the bai bins
  • Added aborting support (thanks @rbuels)
  • Refactored index file class

<a name="1.0.14"></a>

cmdcolin
published 1.0.14 •

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1.0.14 (2019-01-04)

  • Add hasRefSeq for CSI indexes

<a name="1.0.13"></a>

cmdcolin
published 1.0.13 •

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1.0.13 (2018-12-25)

  • Use ascii decoding for read names
  • Fix error with large BAM headers with many refseqs

<a name="1.0.12"></a>

cmdcolin
published 1.0.12 •

Changelog

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1.0.12 (2018-11-25)

  • Faster viewAsPairs operation

<a name="1.0.11"></a>

cmdcolin
published 1.0.11 •

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Source

1.0.11 (2018-11-23)

  • Fix for ie11

<a name="1.0.10"></a>

cmdcolin
published 1.0.10 •

Changelog

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1.0.10 (2018-11-18)

  • Add a maxInsertSize parameter to getRecordsForRange

<a name="1.0.9"></a>

cmdcolin
published 1.0.9 •

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1.0.9 (2018-11-16)

  • Allow bases other than ACGT to be decoded
  • Make viewAsPairs only resolve pairs on given refSeq unless pairAcrossChr is enabled for query

<a name="1.0.8"></a>

cmdcolin
published 1.0.8 •

Changelog

Source

1.0.8 (2018-10-31)

  • Add getPairOrientation for reads

<a name="1.0.7"></a>

cmdcolin
published 1.0.7 •

Changelog

Source

1.0.7 (2018-10-19)

  • Re-release of 1.0.6 due to build machinery error

<a name="1.0.6"></a>

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