This package implements convenience functions for loading datasets in the FASTGenomics analysis environment. The functions from this package will let you list and load datasets for which the analysis was defined.
For the general documentation on how to use the reader, please visit our FASTGenomics Documentation.
For details on the available functions see the API Documentation.
Please report the issues through github.
Clone the repository along with the test data by running
git clone --recurse-submodules git@github.com:FASTGenomics/fgread-py.git
Then enter the fgread-py directory and install the dependencies with
flit install --deps all
To test the package use
python3 -m pytest
FAQs
Module for reading datasets shared on FASTGenomics
We found that fgread demonstrated a healthy version release cadence and project activity because the last version was released less than a year ago. It has 3 open source maintainers collaborating on the project.
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