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miutil

Medical imaging utilities for the AMYPAD and NiftyPET projects

  • 0.13
  • PyPI
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2

miutil

Medical imaging utilities.

|Version| |Py-Versions| |Conda| |Tests| |Coverage| |DOI| |LICENCE|

Basic functionality needed for AMYPAD <https://github.com/AMYPAD/AMYPAD>_ and NiftyPET <https://github.com/NiftyPET/NiftyPET>_.

Install

Intended for inclusion in requirements for other packages. The package name is miutil. Extra install options include:

  • cuda

    • provides miutil.cuinfo <https://github.com/AMYPAD/miutil/blob/master/miutil/cuinfo.py>_
  • mbeautify

    • provides miutil.mlab.beautify <https://github.com/AMYPAD/miutil/blob/master/miutil/mlab/beautify.py>_
  • nii

    • provides miutil.imio.nii <https://github.com/AMYPAD/miutil/blob/master/miutil/imio/nii.py>_
  • plot

    • provides miutil.plot <https://github.com/AMYPAD/miutil/blob/master/miutil/plot.py>_

      • includes a useful 3D multi-volume imscroll function which depends only on matplotlib
  • web

    • provides miutil.web <https://github.com/AMYPAD/miutil/blob/master/miutil/web.py>_

To install extras and their dependencies, use the package name miutil[option1,option2].

.. |Tests| image:: https://img.shields.io/github/actions/workflow/status/AMYPAD/miutil/test.yml?branch=master&logo=GitHub :target: https://github.com/AMYPAD/miutil/actions .. |Coverage| image:: https://codecov.io/gh/AMYPAD/miutil/branch/master/graph/badge.svg :target: https://codecov.io/gh/AMYPAD/miutil .. |Version| image:: https://img.shields.io/pypi/v/miutil.svg?logo=python&logoColor=white :target: https://github.com/AMYPAD/miutil/releases .. |Py-Versions| image:: https://img.shields.io/pypi/pyversions/miutil.svg?logo=python&logoColor=white :target: https://pypi.org/project/miutil .. |Conda| image:: https://img.shields.io/conda/v/conda-forge/miutil.svg?label=conda&logo=conda-forge :target: https://anaconda.org/conda-forge/miutil .. |DOI| image:: https://zenodo.org/badge/DOI/10.5281/zenodo.4281542.svg :target: https://doi.org/10.5281/zenodo.4281542 .. |LICENCE| image:: https://img.shields.io/pypi/l/miutil.svg :target: https://raw.githubusercontent.com/AMYPAD/miutil/master/LICENCE.md

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