scipion-em

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pwem

pwem is a Python module of Scipion framework for image processing in Electron Microscopy

The entire collection is licensed under the terms of the GNU Public License, version 3 (GPLv3).

Development

To install pwem for development purposes, one can do:

.. code-block:: bash

# Create a clean virtual environment
conda create -n scipion python=3.8
conda activate
git clone https://github.com/scipion-em/scipion-em.git
cd scipion-em
pip install -e .

Running tests

.. code-block:: bash

conda activate scipion
cd scipion-em
export SCIPION_DOMAIN="pwem"
python -m unittest discover

API documentation

https://scipion-em.github.io/docs/release-3.0.0/api/pwem/pwem.html