GrPPHATI_rs (WIP)
Rust implementation of various GrPPHATI classes, including:
RustRegularPathHomology
- an implementation of regular path homology producing a basis in parallel, using custom column types.RustGeneratorSparsifier
- a lazy sparsifier written in Rust, meant to work with columns produced by RustRegularPathHomology
.RustPreferredSparsifier
- a non-lazy sparsifier written in Rust, meant to work with columns produced by RustRegularPathHomology
.
Sparsifies columns of each dimension in parallel.
Usage
Note RustRegularPathHomology
does not produce columns in the same order as RegularPathHomology
.
This leads to considerable slow down when using PHATBackend
.
As such, the recommended usage is with LoPHATBackend
, available in grpphati
.
Eirene has not been tested so far.
It is also recommended to use the provided parallel sparsifier.
Good pipelines are provided in grpphati_rs.GrPPH_rs
and grpphai_rs.GrPPH_par_wedge_rs
.
For example usage, please consult examples/disjoint.py
in the repository.
Known issues
- Graphs used with
RustRegularPathHomology
must be integer indexed.