An extension adding Launcher shortcuts to JupyterLab for EMBL Tools.
This extension is composed of a Python package named embl_tools_jl
for the server extension and a NPM package named embl-tools-jl
for the frontend extension.
Scanning for the tools can take long and thus delay the startup of JupyterLab. It is recommended to put EMBL-Tools in the root of your regular work directory you use JupyterLab in. If the scan does not find the EMBL-Tools in the current Jupyter Lab working dir root, the extension will copy the supplied version for temporary use. This copy will be removed at the next startup.
Note: You will need NodeJS to install the extension.
pip install embl_tools_jl
jupyter lab build
If you are seeing the frontend extension but it is not working, check that the server extension is enabled:
jupyter serverextension list
If the server extension is installed and enabled but you are not seeing the frontend, check the frontend is installed:
jupyter labextension list
If it is installed, try:
jupyter lab clean
jupyter lab build
The jlpm command is JupyterLab's pinned version of
yarn that is installed with JupyterLab. You may use
yarn or npm in lieu of jlpm below.
# Clone the repo to your local environment
# Move to embl-tools-jl directory
# Install server extension
pip install -e .
# Register server extension
jupyter serverextension enable --py embl_tools_jl
# Install dependencies
jlpm
# Build Typescript source
jlpm build
# Link your development version of the extension with JupyterLab
jupyter labextension link .
# Rebuild Typescript source after making changes
jlpm build
# Rebuild JupyterLab after making any changes
jupyter lab build
You can watch the source directory and run JupyterLab in watch mode to watch for changes in the extension's source and automatically rebuild the extension and application.
# Watch the source directory in another terminal tab
jlpm watch
# Run jupyterlab in watch mode in one terminal tab
jupyter lab --watch
pip uninstall embl_tools_jl
jupyter labextension uninstall embl-tools-jl
FAQs
An extension adding Launcher shortcuts to JupyterLab for EMBL Tools
We found that embl-tools-jl demonstrated a healthy version release cadence and project activity because the last version was released less than a year ago. It has 1 open source maintainer collaborating on the project.
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