You can install moped using pip
pip install moped
However, you will still need to install NCBI Blast if you want to use the genome / proteome reconstruction methods
If you are using conda or mamba, you can install blast from bioconda:
conda install -c bioconda blast==2.12.0
mamba install -c bioconda blast==2.12.0
If you want to install BLAST yourself:
export PATH="your_blast_directory/bin:$PATH"Check out our tutorial on readthedocs
All contributions, bug reports, bug fixes, documentation improvements, enhancements and ideas are welcome. If you want to contribute code to the project, please consider our contribution guide
moped is licensed under GPL 3
If you experience issues using the software please contact us through our issues page.
FAQs
Stoichiometric metabolic modelling
We found that moped demonstrated a healthy version release cadence and project activity because the last version was released less than a year ago. It has 2 open source maintainers collaborating on the project.
Did you know?
Socket for GitHub automatically highlights issues in each pull request and monitors the health of all your open source dependencies. Discover the contents of your packages and block harmful activity before you install or update your dependencies.
Security News
vlt's new "reproduce" tool verifies npm packages against their source code, outperforming traditional provenance adoption in the JavaScript ecosystem.
Research
Security News
Socket researchers uncovered a malicious PyPI package exploiting Deezer’s API to enable coordinated music piracy through API abuse and C2 server control.
Research
The Socket Research Team discovered a malicious npm package, '@ton-wallet/create', stealing cryptocurrency wallet keys from developers and users in the TON ecosystem.